Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 28% ± 11% | |
oligodendrocyte precursor cell | 8 studies | 31% ± 13% | |
astrocyte | 8 studies | 28% ± 9% | |
B cell | 7 studies | 20% ± 4% | |
GABAergic neuron | 7 studies | 39% ± 16% | |
oligodendrocyte | 7 studies | 26% ± 7% | |
interneuron | 6 studies | 38% ± 18% | |
macrophage | 6 studies | 29% ± 5% | |
microglial cell | 5 studies | 25% ± 7% | |
neuron | 5 studies | 37% ± 12% | |
epithelial cell | 5 studies | 30% ± 9% | |
type I pneumocyte | 5 studies | 21% ± 8% | |
type II pneumocyte | 5 studies | 19% ± 6% | |
ciliated cell | 4 studies | 24% ± 6% | |
glutamatergic neuron | 4 studies | 51% ± 10% | |
fibroblast | 4 studies | 26% ± 6% | |
smooth muscle cell | 4 studies | 18% ± 1% | |
hematopoietic precursor cell | 3 studies | 21% ± 4% | |
Mueller cell | 3 studies | 18% ± 1% | |
abnormal cell | 3 studies | 27% ± 13% | |
alveolar macrophage | 3 studies | 21% ± 6% | |
endothelial cell of lymphatic vessel | 3 studies | 19% ± 2% | |
pericyte | 3 studies | 22% ± 5% | |
goblet cell | 3 studies | 31% ± 19% | |
transit amplifying cell | 3 studies | 37% ± 19% | |
adipocyte | 3 studies | 20% ± 4% | |
plasmacytoid dendritic cell | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2577.57 | 1445 / 1445 | 100% | 33.60 | 183 / 183 |
lung | 100% | 3143.90 | 578 / 578 | 100% | 27.57 | 1154 / 1155 |
ovary | 100% | 4423.33 | 180 / 180 | 100% | 18.91 | 429 / 430 |
stomach | 100% | 2171.58 | 359 / 359 | 100% | 26.09 | 285 / 286 |
thymus | 100% | 4043.66 | 653 / 653 | 100% | 21.88 | 602 / 605 |
breast | 100% | 3512.86 | 459 / 459 | 99% | 28.55 | 1112 / 1118 |
intestine | 100% | 2770.08 | 966 / 966 | 99% | 25.08 | 524 / 527 |
bladder | 100% | 2909.71 | 21 / 21 | 99% | 21.40 | 500 / 504 |
uterus | 100% | 3835.17 | 170 / 170 | 98% | 25.36 | 452 / 459 |
pancreas | 100% | 1933.42 | 327 / 328 | 98% | 17.07 | 175 / 178 |
kidney | 100% | 1976.13 | 89 / 89 | 98% | 21.00 | 883 / 901 |
prostate | 100% | 2729.68 | 245 / 245 | 98% | 15.62 | 490 / 502 |
skin | 100% | 3473.56 | 1809 / 1809 | 97% | 27.80 | 458 / 472 |
brain | 96% | 1272.97 | 2527 / 2642 | 100% | 21.56 | 702 / 705 |
adrenal gland | 100% | 2330.79 | 258 / 258 | 89% | 8.85 | 204 / 230 |
liver | 100% | 1323.96 | 226 / 226 | 87% | 10.36 | 355 / 406 |
adipose | 100% | 3384.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2770.73 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 22.78 | 29 / 29 |
spleen | 100% | 3204.51 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 29.52 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.50 | 1 / 1 |
muscle | 100% | 1681.20 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1475.23 | 834 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 13.19 | 73 / 80 |
peripheral blood | 62% | 1813.37 | 579 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006913 | Biological process | nucleocytoplasmic transport |
GO_0006406 | Biological process | mRNA export from nucleus |
GO_0015031 | Biological process | protein transport |
GO_0072006 | Biological process | nephron development |
GO_0000776 | Cellular component | kinetochore |
GO_0005829 | Cellular component | cytosol |
GO_0005643 | Cellular component | nuclear pore |
GO_0031080 | Cellular component | nuclear pore outer ring |
GO_0005635 | Cellular component | nuclear envelope |
GO_0017056 | Molecular function | structural constituent of nuclear pore |
GO_0005515 | Molecular function | protein binding |
Gene name | NUP160 |
Protein name | Nuclear pore complex protein Nup160 (160 kDa nucleoporin) (Nucleoporin Nup160) Nucleoporin 160 |
Synonyms | KIAA0197 NUP120 |
Description | FUNCTION: Functions as a component of the nuclear pore complex (NPC) . Involved in poly(A)+ RNA transport. . |
Accessions | ENST00000528071.5 A0A8V8NBT1 E9PSI3 A0A8Q3WK58 G3V198 Q12769 ENST00000528501.5 ENST00000530326.5 E9PR16 ENST00000378460.7 ENST00000526870.1 [Q12769-2] ENST00000694866.1 [Q12769-1] ENST00000694867.1 |