Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 29% ± 9% | |
astrocyte | 11 studies | 29% ± 15% | |
glutamatergic neuron | 10 studies | 39% ± 23% | |
oligodendrocyte | 10 studies | 28% ± 10% | |
microglial cell | 9 studies | 25% ± 9% | |
oligodendrocyte precursor cell | 8 studies | 25% ± 12% | |
GABAergic neuron | 8 studies | 36% ± 22% | |
fibroblast | 7 studies | 20% ± 5% | |
macrophage | 6 studies | 25% ± 8% | |
neuron | 5 studies | 31% ± 12% | |
epithelial cell | 5 studies | 33% ± 9% | |
adipocyte | 5 studies | 21% ± 3% | |
cardiac muscle cell | 4 studies | 16% ± 1% | |
lymphocyte | 4 studies | 22% ± 6% | |
goblet cell | 4 studies | 27% ± 17% | |
interneuron | 4 studies | 44% ± 22% | |
GABAergic interneuron | 3 studies | 22% ± 3% | |
retinal ganglion cell | 3 studies | 38% ± 12% | |
retinal cone cell | 3 studies | 17% ± 2% | |
ciliated cell | 3 studies | 29% ± 2% | |
myeloid cell | 3 studies | 17% ± 1% | |
type I pneumocyte | 3 studies | 20% ± 4% | |
type II pneumocyte | 3 studies | 22% ± 5% | |
abnormal cell | 3 studies | 29% ± 7% | |
endothelial cell of lymphatic vessel | 3 studies | 22% ± 3% | |
smooth muscle cell | 3 studies | 16% ± 1% | |
basal cell | 3 studies | 30% ± 13% | |
transit amplifying cell | 3 studies | 32% ± 16% | |
granule cell | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 6011.26 | 459 / 459 | 100% | 45.47 | 1118 / 1118 |
esophagus | 100% | 6690.36 | 1445 / 1445 | 100% | 32.83 | 183 / 183 |
kidney | 100% | 4602.49 | 89 / 89 | 100% | 39.40 | 901 / 901 |
ovary | 100% | 6431.82 | 180 / 180 | 100% | 29.50 | 430 / 430 |
prostate | 100% | 7197.71 | 245 / 245 | 100% | 40.06 | 502 / 502 |
skin | 100% | 6321.93 | 1809 / 1809 | 100% | 51.63 | 472 / 472 |
stomach | 100% | 4379.08 | 359 / 359 | 100% | 31.68 | 286 / 286 |
brain | 100% | 10474.02 | 2641 / 2642 | 100% | 66.66 | 705 / 705 |
lung | 100% | 4824.18 | 578 / 578 | 100% | 35.40 | 1154 / 1155 |
thymus | 100% | 5500.13 | 653 / 653 | 100% | 36.06 | 604 / 605 |
uterus | 100% | 7132.41 | 170 / 170 | 100% | 32.88 | 458 / 459 |
intestine | 100% | 5845.09 | 966 / 966 | 99% | 35.19 | 524 / 527 |
bladder | 100% | 6735.90 | 21 / 21 | 99% | 34.87 | 500 / 504 |
pancreas | 100% | 2947.84 | 327 / 328 | 99% | 36.51 | 177 / 178 |
liver | 100% | 3156.80 | 226 / 226 | 99% | 22.06 | 402 / 406 |
adrenal gland | 100% | 6300.26 | 258 / 258 | 99% | 40.95 | 227 / 230 |
adipose | 100% | 5488.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7251.43 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 35.93 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.71 | 29 / 29 |
muscle | 100% | 8413.38 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 5152.76 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.90 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.43 | 1 / 1 |
heart | 99% | 5272.58 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 73% | 2355.76 | 678 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0006457 | Biological process | protein folding |
GO_1905793 | Biological process | protein localization to pericentriolar material |
GO_0005868 | Cellular component | cytoplasmic dynein complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0051082 | Molecular function | unfolded protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | NUDCD3 |
Protein name | NudC domain-containing protein 3 |
Synonyms | KIAA1068 |
Description | |
Accessions | Q8IVD9 ENST00000355451.8 |