Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 17 studies | 24% ± 8% | |
oligodendrocyte | 15 studies | 49% ± 17% | |
ciliated cell | 14 studies | 26% ± 9% | |
type I pneumocyte | 9 studies | 26% ± 8% | |
epithelial cell | 7 studies | 40% ± 18% | |
macrophage | 7 studies | 25% ± 7% | |
astrocyte | 7 studies | 37% ± 16% | |
basal cell | 7 studies | 28% ± 13% | |
fibroblast | 6 studies | 26% ± 8% | |
adipocyte | 6 studies | 25% ± 3% | |
type II pneumocyte | 6 studies | 25% ± 5% | |
GABAergic neuron | 6 studies | 34% ± 16% | |
B cell | 5 studies | 18% ± 3% | |
smooth muscle cell | 5 studies | 23% ± 5% | |
club cell | 5 studies | 24% ± 6% | |
retinal pigment epithelial cell | 4 studies | 31% ± 9% | |
cardiac muscle cell | 4 studies | 34% ± 3% | |
glutamatergic neuron | 4 studies | 54% ± 18% | |
oligodendrocyte precursor cell | 4 studies | 23% ± 7% | |
memory B cell | 4 studies | 16% ± 1% | |
neuron | 3 studies | 36% ± 21% | |
retinal ganglion cell | 3 studies | 31% ± 6% | |
plasma cell | 3 studies | 25% ± 10% | |
retinal cone cell | 3 studies | 27% ± 6% | |
retina horizontal cell | 3 studies | 27% ± 12% | |
hepatocyte | 3 studies | 54% ± 15% | |
dendritic cell | 3 studies | 24% ± 6% | |
ependymal cell | 3 studies | 30% ± 12% | |
intestinal crypt stem cell | 3 studies | 19% ± 2% | |
T cell | 3 studies | 20% ± 2% | |
lymphocyte | 3 studies | 22% ± 5% | |
goblet cell | 3 studies | 30% ± 18% | |
transit amplifying cell | 3 studies | 34% ± 24% | |
interneuron | 3 studies | 43% ± 16% | |
microglial cell | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1909.53 | 459 / 459 | 100% | 22.13 | 1118 / 1118 |
prostate | 100% | 2458.41 | 245 / 245 | 100% | 31.92 | 501 / 502 |
stomach | 100% | 1905.23 | 359 / 359 | 100% | 16.28 | 285 / 286 |
thymus | 100% | 2180.32 | 653 / 653 | 100% | 24.29 | 602 / 605 |
pancreas | 99% | 1149.69 | 326 / 328 | 100% | 12.88 | 178 / 178 |
intestine | 100% | 1562.43 | 965 / 966 | 99% | 17.24 | 524 / 527 |
esophagus | 100% | 1323.63 | 1443 / 1445 | 99% | 15.63 | 182 / 183 |
kidney | 100% | 2374.01 | 89 / 89 | 99% | 16.63 | 894 / 901 |
bladder | 100% | 1837.24 | 21 / 21 | 99% | 13.75 | 499 / 504 |
lung | 99% | 1565.15 | 573 / 578 | 100% | 16.17 | 1152 / 1155 |
uterus | 99% | 1169.65 | 169 / 170 | 99% | 13.74 | 454 / 459 |
liver | 100% | 2047.32 | 226 / 226 | 98% | 11.28 | 398 / 406 |
ovary | 100% | 1157.73 | 180 / 180 | 97% | 8.75 | 419 / 430 |
adrenal gland | 100% | 3597.31 | 258 / 258 | 97% | 15.18 | 224 / 230 |
skin | 100% | 1422.56 | 1805 / 1809 | 95% | 11.87 | 447 / 472 |
brain | 100% | 1741.47 | 2636 / 2642 | 89% | 7.38 | 630 / 705 |
adipose | 100% | 1470.19 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3162.83 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 15.82 | 29 / 29 |
spleen | 100% | 1378.02 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.86 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.20 | 1 / 1 |
muscle | 100% | 1278.52 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 93% | 1554.48 | 799 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 14.03 | 74 / 80 |
peripheral blood | 68% | 1604.32 | 634 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008253 | Molecular function | 5'-nucleotidase activity |
GO_0046872 | Molecular function | metal ion binding |
Gene name | NT5DC1 |
Protein name | 5'-nucleotidase domain-containing protein 1 (EC 3.1.3.-) 5'-nucleotidase domain containing 1, isoform CRA_c (HT023) 5'-nucleotidase domain containing 1 |
Synonyms | hCG_2031155 NT5C2L1 LP2642 |
Description | |
Accessions | ENST00000460749.1 Q5QPD0 ENST00000419791.3 Q9H2R1 Q5TFE4 ENST00000319550.9 [Q5TFE4-1] H0YDA5 |