Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 33% ± 18% | |
fibroblast | 14 studies | 44% ± 24% | |
glutamatergic neuron | 11 studies | 41% ± 23% | |
connective tissue cell | 10 studies | 57% ± 27% | |
pericyte | 10 studies | 57% ± 22% | |
smooth muscle cell | 10 studies | 47% ± 26% | |
myofibroblast cell | 8 studies | 62% ± 23% | |
epithelial cell | 8 studies | 38% ± 24% | |
neuron | 8 studies | 63% ± 27% | |
progenitor cell | 7 studies | 44% ± 24% | |
astrocyte | 7 studies | 35% ± 16% | |
interneuron | 7 studies | 50% ± 22% | |
plasmacytoid dendritic cell | 7 studies | 26% ± 14% | |
mesothelial cell | 6 studies | 80% ± 22% | |
GABAergic neuron | 6 studies | 44% ± 14% | |
vein endothelial cell | 5 studies | 36% ± 27% | |
hematopoietic stem cell | 5 studies | 28% ± 16% | |
pro-B cell | 5 studies | 46% ± 14% | |
precursor B cell | 5 studies | 45% ± 12% | |
amacrine cell | 5 studies | 49% ± 17% | |
hematopoietic precursor cell | 4 studies | 50% ± 16% | |
granule cell | 4 studies | 41% ± 16% | |
oligodendrocyte precursor cell | 4 studies | 32% ± 12% | |
GABAergic amacrine cell | 4 studies | 36% ± 8% | |
retinal ganglion cell | 4 studies | 49% ± 23% | |
retinal cone cell | 4 studies | 49% ± 24% | |
OFF-bipolar cell | 4 studies | 27% ± 7% | |
ON-bipolar cell | 4 studies | 25% ± 4% | |
chondrocyte | 4 studies | 42% ± 22% | |
conventional dendritic cell | 3 studies | 52% ± 18% | |
epithelial cell of proximal tubule | 3 studies | 44% ± 24% | |
abnormal cell | 3 studies | 42% ± 8% | |
endothelial cell of artery | 3 studies | 45% ± 26% | |
enteroendocrine cell | 3 studies | 34% ± 12% | |
neural crest cell | 3 studies | 45% ± 15% | |
glial cell | 3 studies | 39% ± 20% | |
brush cell | 3 studies | 40% ± 27% | |
basal cell | 3 studies | 33% ± 3% | |
capillary endothelial cell | 3 studies | 38% ± 21% | |
endothelial cell of lymphatic vessel | 3 studies | 23% ± 11% | |
retina horizontal cell | 3 studies | 34% ± 13% | |
retinal bipolar neuron | 3 studies | 32% ± 12% | |
glycinergic amacrine cell | 3 studies | 27% ± 2% | |
rod bipolar cell | 3 studies | 22% ± 7% | |
dendritic cell | 3 studies | 28% ± 8% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 52% ± 20% | |
hepatocyte | 3 studies | 57% ± 25% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 99% | 1798.34 | 178 / 180 | 90% | 3.67 | 389 / 430 |
brain | 97% | 5930.38 | 2575 / 2642 | 86% | 2.49 | 607 / 705 |
kidney | 99% | 1648.02 | 88 / 89 | 76% | 2.00 | 686 / 901 |
esophagus | 84% | 881.81 | 1210 / 1445 | 72% | 1.88 | 131 / 183 |
breast | 78% | 751.50 | 358 / 459 | 69% | 1.53 | 770 / 1118 |
uterus | 99% | 1891.93 | 168 / 170 | 48% | 1.22 | 220 / 459 |
stomach | 87% | 669.92 | 311 / 359 | 56% | 1.25 | 161 / 286 |
adrenal gland | 99% | 2811.75 | 255 / 258 | 43% | 0.82 | 100 / 230 |
lung | 90% | 949.33 | 518 / 578 | 43% | 0.96 | 498 / 1155 |
intestine | 96% | 1332.87 | 925 / 966 | 36% | 0.63 | 188 / 527 |
prostate | 96% | 1601.53 | 236 / 245 | 32% | 0.46 | 159 / 502 |
thymus | 86% | 836.42 | 559 / 653 | 18% | 0.63 | 109 / 605 |
spleen | 100% | 1588.47 | 241 / 241 | 0% | 0 | 0 / 0 |
skin | 77% | 1562.56 | 1385 / 1809 | 22% | 0.54 | 103 / 472 |
bladder | 67% | 657.95 | 14 / 21 | 29% | 0.73 | 146 / 504 |
liver | 65% | 614.56 | 148 / 226 | 28% | 0.51 | 112 / 406 |
blood vessel | 92% | 1303.52 | 1227 / 1335 | 0% | 0 | 0 / 0 |
heart | 91% | 1147.76 | 786 / 861 | 0% | 0 | 0 / 0 |
pancreas | 21% | 115.02 | 69 / 328 | 66% | 1.30 | 118 / 178 |
adipose | 78% | 770.70 | 937 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 44% | 0.71 | 20 / 45 |
muscle | 37% | 766.11 | 299 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 28% | 562.15 | 263 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.11 | 2 / 29 |
eye | 0% | 0 | 0 / 0 | 1% | 0.01 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045664 | Biological process | regulation of neuron differentiation |
GO_0017015 | Biological process | regulation of transforming growth factor beta receptor signaling pathway |
GO_0031103 | Biological process | axon regeneration |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | NREP |
Protein name | Neuronal regeneration-related protein (Neuronal protein 3.1) (Protein p311) |
Synonyms | P311 C5orf13 |
Description | FUNCTION: May have roles in neural function. Ectopic expression augments motility of gliomas. Promotes also axonal regeneration (By similarity). May also have functions in cellular differentiation (By similarity). Induces differentiation of fibroblast into myofibroblast and myofibroblast ameboid migration. Increases retinoic-acid regulation of lipid-droplet biogenesis (By similarity). Down-regulates the expression of TGFB1 and TGFB2 but not of TGFB3 (By similarity). May play a role in the regulation of alveolar generation. . |
Accessions | ENST00000419114.6 [Q16612-1] ENST00000455559.6 [Q16612-1] ENST00000508870.5 [Q16612-1] ENST00000514515.5 ENST00000513100.5 Q16612 D6R982 D6RIC9 ENST00000453526.6 [Q16612-1] ENST00000395634.7 [Q16612-2] ENST00000509979.5 ENST00000508161.5 D6REJ5 ENST00000379671.7 [Q16612-1] ENST00000257435.12 [Q16612-1] ENST00000515855.5 D6R9Y7 ENST00000447165.6 [Q16612-1] ENST00000509427.5 [Q16612-1] ENST00000446294.6 [Q16612-1] ENST00000509025.5 ENST00000450761.6 [Q16612-1] |