NKX2-3 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
pericyte	4 studies	25% ± 6%	Explore
endothelial cell	4 studies	29% ± 10%	Explore
fibroblast	3 studies	32% ± 11%	Explore
myofibroblast cell	3 studies	30% ± 3%	Explore
smooth muscle cell	3 studies	19% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
intestine	3 studies	25% ± 11%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	100%	2755.98	963 / 966	83%	4.40	438 / 527
pancreas	38%	87.96	123 / 328	89%	8.79	158 / 178
stomach	52%	144.77	185 / 359	70%	3.26	201 / 286
spleen	100%	2954.68	241 / 241	0%	0	0 / 0
prostate	2%	3.88	4 / 245	74%	3.36	373 / 502
tonsil	0%	0	0 / 0	69%	9.39	31 / 45
thymus	33%	121.06	216 / 653	20%	0.96	122 / 605
esophagus	4%	8.53	51 / 1445	25%	0.78	45 / 183
bladder	0%	0	0 / 21	27%	1.65	134 / 504
uterus	0%	0	0 / 170	24%	1.24	110 / 459
lung	0%	0	0 / 578	21%	1.15	239 / 1155
adipose	13%	41.60	152 / 1204	0%	0	0 / 0
adrenal gland	0%	0.76	1 / 258	7%	0.18	17 / 230
kidney	0%	0	0 / 89	7%	0.28	66 / 901
lymph node	0%	0	0 / 0	7%	0.18	2 / 29
breast	0%	5.25	2 / 459	6%	0.21	63 / 1118
skin	0%	0.20	2 / 1809	6%	0.11	28 / 472
liver	0%	0	0 / 226	5%	0.15	20 / 406
ovary	1%	0.86	1 / 180	3%	0.09	14 / 430
eye	0%	0	0 / 0	1%	0.02	1 / 80
brain	0%	0	0 / 2642	1%	0.01	4 / 705
blood vessel	0%	0.67	4 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1