Insufficient scRNA-seq data for expression of NKX1-2 at single-cell level.
Insufficient scRNA-seq data for expression of NKX1-2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 78% | 31.72 | 2059 / 2642 | 26% | 0.59 | 185 / 705 |
esophagus | 37% | 26.73 | 540 / 1445 | 38% | 2.70 | 69 / 183 |
skin | 68% | 32.73 | 1222 / 1809 | 1% | 0.05 | 3 / 472 |
breast | 45% | 17.58 | 207 / 459 | 16% | 1.45 | 178 / 1118 |
lung | 2% | 0.39 | 14 / 578 | 34% | 2.53 | 395 / 1155 |
tonsil | 0% | 0 | 0 / 0 | 36% | 1.43 | 16 / 45 |
uterus | 2% | 0.94 | 4 / 170 | 30% | 1.31 | 137 / 459 |
prostate | 18% | 3.40 | 43 / 245 | 0% | 0 | 0 / 502 |
bladder | 0% | 0 | 0 / 21 | 13% | 0.76 | 64 / 504 |
intestine | 7% | 1.16 | 72 / 966 | 1% | 0.08 | 7 / 527 |
pancreas | 0% | 0 | 0 / 328 | 4% | 0.09 | 7 / 178 |
liver | 0% | 0.04 | 1 / 226 | 2% | 0.30 | 10 / 406 |
stomach | 1% | 0.07 | 2 / 359 | 2% | 0.06 | 6 / 286 |
ovary | 1% | 0.12 | 1 / 180 | 2% | 0.07 | 9 / 430 |
adrenal gland | 0% | 0 | 0 / 258 | 3% | 0.07 | 6 / 230 |
thymus | 0% | 0.05 | 3 / 653 | 0% | 0.08 | 3 / 605 |
adipose | 1% | 0.11 | 7 / 1204 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.02 | 2 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0.03 | 2 / 1335 | 0% | 0 | 0 / 0 |
heart | 0% | 0.01 | 1 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.09 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
kidney | 0% | 0 | 0 / 89 | 0% | 0 | 0 / 901 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030154 | Biological process | cell differentiation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | NKX1-2 |
Protein name | NK1 transcription factor-related protein 2 (Homeobox protein SAX-1) (NKX-1.1) |
Synonyms | C10orf121 NKX1.1 |
Description | FUNCTION: May function in cell specification, particularly in the CNS. . |
Accessions | ENST00000451024.5 Q9UD57 |