Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 11 studies | 43% ± 21% | |
GABAergic neuron | 7 studies | 42% ± 19% | |
endothelial cell | 7 studies | 30% ± 13% | |
neuron | 6 studies | 40% ± 14% | |
retinal cone cell | 6 studies | 37% ± 17% | |
astrocyte | 6 studies | 28% ± 10% | |
ON-bipolar cell | 5 studies | 47% ± 27% | |
retinal ganglion cell | 5 studies | 69% ± 32% | |
retinal rod cell | 5 studies | 22% ± 4% | |
oligodendrocyte | 5 studies | 22% ± 8% | |
OFF-bipolar cell | 4 studies | 50% ± 27% | |
amacrine cell | 4 studies | 37% ± 11% | |
retina horizontal cell | 4 studies | 25% ± 4% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 7% | |
interneuron | 4 studies | 47% ± 23% | |
retinal bipolar neuron | 3 studies | 46% ± 6% | |
GABAergic interneuron | 3 studies | 23% ± 2% | |
GABAergic amacrine cell | 3 studies | 37% ± 9% | |
rod bipolar cell | 3 studies | 31% ± 10% | |
granule cell | 3 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 18756.79 | 2628 / 2642 | 100% | 62.79 | 705 / 705 |
adrenal gland | 100% | 2804.00 | 257 / 258 | 100% | 73.48 | 229 / 230 |
bladder | 100% | 1637.43 | 21 / 21 | 98% | 9.37 | 495 / 504 |
thymus | 97% | 1914.38 | 632 / 653 | 99% | 10.54 | 597 / 605 |
prostate | 93% | 1623.60 | 229 / 245 | 99% | 8.04 | 497 / 502 |
uterus | 94% | 1960.79 | 159 / 170 | 98% | 8.98 | 450 / 459 |
lung | 91% | 1598.94 | 524 / 578 | 96% | 9.03 | 1111 / 1155 |
ovary | 98% | 2511.60 | 176 / 180 | 89% | 6.50 | 382 / 430 |
esophagus | 85% | 1442.93 | 1227 / 1445 | 98% | 9.57 | 180 / 183 |
intestine | 88% | 1607.03 | 847 / 966 | 93% | 8.31 | 492 / 527 |
breast | 78% | 1206.46 | 357 / 459 | 98% | 12.00 | 1101 / 1118 |
skin | 70% | 1071.30 | 1260 / 1809 | 93% | 9.01 | 439 / 472 |
kidney | 66% | 993.13 | 59 / 89 | 95% | 7.55 | 858 / 901 |
stomach | 50% | 767.69 | 181 / 359 | 92% | 8.04 | 262 / 286 |
pancreas | 15% | 198.94 | 50 / 328 | 98% | 11.29 | 175 / 178 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.66 | 1 / 1 |
liver | 17% | 205.69 | 39 / 226 | 76% | 4.61 | 309 / 406 |
spleen | 93% | 1643.78 | 225 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 8.54 | 42 / 45 |
lymph node | 0% | 0 | 0 / 0 | 90% | 5.84 | 26 / 29 |
eye | 0% | 0 | 0 / 0 | 85% | 9.96 | 68 / 80 |
blood vessel | 81% | 1302.07 | 1080 / 1335 | 0% | 0 | 0 / 0 |
adipose | 74% | 1168.71 | 887 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 28% | 511.37 | 257 / 929 | 0% | 0 | 0 / 0 |
heart | 27% | 370.53 | 230 / 861 | 0% | 0 | 0 / 0 |
muscle | 16% | 215.46 | 131 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006886 | Biological process | intracellular protein transport |
GO_0010807 | Biological process | regulation of synaptic vesicle priming |
GO_0035249 | Biological process | synaptic transmission, glutamatergic |
GO_0035494 | Biological process | SNARE complex disassembly |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0070044 | Cellular component | synaptobrevin 2-SNAP-25-syntaxin-1a complex |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005483 | Molecular function | soluble NSF attachment protein activity |
GO_0005515 | Molecular function | protein binding |
GO_0019905 | Molecular function | syntaxin binding |
Gene name | NAPB |
Protein name | Beta-soluble NSF attachment protein (SNAP-beta) (N-ethylmaleimide-sensitive factor attachment protein beta) N-ethylmaleimide-sensitive factor attachment protein, beta, isoform CRA_d (NSF attachment protein beta) |
Synonyms | SNAPB hCG_22369 |
Description | FUNCTION: Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. . FUNCTION: Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. . |
Accessions | ENST00000617876.4 ENST00000377026.4 [Q9H115-1] A0A087WZQ7 ENST00000432543.6 [Q9H115-2] Q9H115 ENST00000398425.7 [Q9H115-3] |