Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 22 studies | 42% ± 22% | |
glutamatergic neuron | 12 studies | 60% ± 22% | |
GABAergic neuron | 11 studies | 53% ± 28% | |
oligodendrocyte precursor cell | 11 studies | 29% ± 11% | |
astrocyte | 7 studies | 32% ± 19% | |
interneuron | 6 studies | 54% ± 33% | |
retinal pigment epithelial cell | 5 studies | 60% ± 22% | |
vein endothelial cell | 5 studies | 39% ± 27% | |
oligodendrocyte | 5 studies | 30% ± 18% | |
hepatocyte | 4 studies | 56% ± 25% | |
neuron | 4 studies | 38% ± 9% | |
granule cell | 4 studies | 63% ± 2% | |
endothelial cell of sinusoid | 3 studies | 43% ± 12% | |
GABAergic interneuron | 3 studies | 60% ± 11% | |
epithelial cell | 3 studies | 40% ± 24% | |
endocardial cell | 3 studies | 48% ± 21% | |
GABAergic amacrine cell | 3 studies | 29% ± 10% | |
Mueller cell | 3 studies | 52% ± 20% | |
retinal ganglion cell | 3 studies | 33% ± 16% | |
retinal rod cell | 3 studies | 23% ± 4% | |
endothelial cell of vascular tree | 3 studies | 53% ± 22% | |
ependymal cell | 3 studies | 34% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 2463.91 | 2627 / 2642 | 94% | 10.26 | 665 / 705 |
prostate | 82% | 405.02 | 202 / 245 | 97% | 11.30 | 488 / 502 |
liver | 100% | 1240.98 | 226 / 226 | 73% | 12.42 | 298 / 406 |
intestine | 96% | 572.45 | 931 / 966 | 62% | 4.68 | 325 / 527 |
stomach | 99% | 856.45 | 357 / 359 | 55% | 4.11 | 156 / 286 |
breast | 97% | 908.58 | 445 / 459 | 52% | 2.82 | 576 / 1118 |
ovary | 95% | 621.57 | 171 / 180 | 47% | 2.00 | 204 / 430 |
pancreas | 100% | 636.04 | 328 / 328 | 27% | 1.03 | 48 / 178 |
uterus | 99% | 964.14 | 168 / 170 | 16% | 0.94 | 75 / 459 |
thymus | 81% | 371.14 | 532 / 653 | 32% | 1.16 | 193 / 605 |
bladder | 81% | 309.43 | 17 / 21 | 24% | 1.58 | 121 / 504 |
spleen | 98% | 852.56 | 237 / 241 | 0% | 0 | 0 / 0 |
adipose | 96% | 872.15 | 1161 / 1204 | 0% | 0 | 0 / 0 |
esophagus | 74% | 346.12 | 1065 / 1445 | 16% | 0.77 | 29 / 183 |
kidney | 42% | 129.51 | 37 / 89 | 47% | 5.53 | 423 / 901 |
adrenal gland | 19% | 57.41 | 49 / 258 | 62% | 6.83 | 143 / 230 |
blood vessel | 81% | 965.58 | 1080 / 1335 | 0% | 0 | 0 / 0 |
skin | 41% | 160.46 | 743 / 1809 | 16% | 1.01 | 74 / 472 |
lung | 30% | 119.04 | 172 / 578 | 17% | 0.71 | 193 / 1155 |
heart | 45% | 217.27 | 388 / 861 | 0% | 0 | 0 / 0 |
muscle | 34% | 115.31 | 274 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.96 | 5 / 29 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.72 | 3 / 45 |
eye | 0% | 0 | 0 / 0 | 6% | 0.22 | 5 / 80 |
peripheral blood | 1% | 3.57 | 11 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032024 | Biological process | positive regulation of insulin secretion |
GO_0006886 | Biological process | intracellular protein transport |
GO_0042470 | Cellular component | melanosome |
GO_0001750 | Cellular component | photoreceptor outer segment |
GO_0045202 | Cellular component | synapse |
GO_0030864 | Cellular component | cortical actin cytoskeleton |
GO_0031045 | Cellular component | dense core granule |
GO_0000145 | Cellular component | exocyst |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0030133 | Cellular component | transport vesicle |
GO_0017022 | Molecular function | myosin binding |
GO_0051018 | Molecular function | protein kinase A binding |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | MYRIP |
Protein name | Rab effector MyRIP (Exophilin-8) (Myosin-VIIa- and Rab-interacting protein) (Synaptotagmin-like protein lacking C2 domains C) (SlaC2-c) (Slp homolog lacking C2 domains c) Myosin VIIA and Rab interacting protein |
Synonyms | SLAC2C |
Description | FUNCTION: Rab effector protein involved in melanosome transport. Serves as link between melanosome-bound RAB27A and the motor proteins MYO5A and MYO7A. May link RAB27A-containing vesicles to actin filaments. Functions as a protein kinase A-anchoring protein (AKAP). May act as a scaffolding protein that links PKA to components of the exocytosis machinery, thus facilitating exocytosis, including insulin release (By similarity). . |
Accessions | F8WFC5 Q8NFW9 ENST00000458292.5 [Q8NFW9-5] ENST00000396217.7 [Q8NFW9-6] ENST00000539167.2 [Q8NFW9-4] ENST00000458441.5 ENST00000444716.5 [Q8NFW9-1] ENST00000425621.5 [Q8NFW9-2] ENST00000302541.11 [Q8NFW9-1] |