Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 12 studies | 42% ± 20% | |
GABAergic neuron | 11 studies | 38% ± 17% | |
astrocyte | 8 studies | 27% ± 17% | |
glutamatergic neuron | 8 studies | 42% ± 11% | |
interneuron | 6 studies | 46% ± 12% | |
type I pneumocyte | 5 studies | 34% ± 11% | |
adipocyte | 4 studies | 21% ± 3% | |
GABAergic interneuron | 3 studies | 45% ± 7% | |
granule cell | 3 studies | 32% ± 9% | |
neuron | 3 studies | 39% ± 16% | |
mast cell | 3 studies | 23% ± 5% | |
hepatocyte | 3 studies | 26% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 12 studies | 29% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 393.73 | 2600 / 2642 | 94% | 9.38 | 666 / 705 |
adrenal gland | 100% | 357.83 | 257 / 258 | 17% | 0.47 | 40 / 230 |
liver | 90% | 223.59 | 204 / 226 | 24% | 0.51 | 99 / 406 |
lung | 86% | 143.36 | 498 / 578 | 13% | 0.41 | 155 / 1155 |
breast | 84% | 185.35 | 387 / 459 | 10% | 0.37 | 116 / 1118 |
adipose | 91% | 198.73 | 1091 / 1204 | 0% | 0 | 0 / 0 |
esophagus | 78% | 285.33 | 1127 / 1445 | 13% | 0.29 | 23 / 183 |
heart | 90% | 307.44 | 776 / 861 | 0% | 0 | 0 / 0 |
prostate | 76% | 110.78 | 185 / 245 | 8% | 0.19 | 41 / 502 |
intestine | 52% | 69.65 | 500 / 966 | 2% | 0.05 | 11 / 527 |
skin | 32% | 45.88 | 580 / 1809 | 16% | 0.46 | 77 / 472 |
stomach | 39% | 42.35 | 139 / 359 | 6% | 0.13 | 16 / 286 |
thymus | 34% | 28.81 | 224 / 653 | 1% | 0.02 | 8 / 605 |
ovary | 29% | 26.71 | 53 / 180 | 6% | 0.14 | 24 / 430 |
blood vessel | 28% | 24.90 | 369 / 1335 | 0% | 0 | 0 / 0 |
uterus | 15% | 11.75 | 26 / 170 | 6% | 0.21 | 26 / 459 |
bladder | 14% | 12.38 | 3 / 21 | 5% | 0.11 | 24 / 504 |
kidney | 10% | 7.51 | 9 / 89 | 5% | 0.15 | 42 / 901 |
spleen | 12% | 7.51 | 28 / 241 | 0% | 0 | 0 / 0 |
pancreas | 6% | 4.34 | 19 / 328 | 5% | 0.13 | 9 / 178 |
muscle | 8% | 8.44 | 65 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 3% | 0.10 | 2 / 80 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.02 | 1 / 45 |
peripheral blood | 2% | 1.14 | 14 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048812 | Biological process | neuron projection morphogenesis |
GO_0021549 | Biological process | cerebellum development |
GO_2000134 | Biological process | negative regulation of G1/S transition of mitotic cell cycle |
GO_0043491 | Biological process | phosphatidylinositol 3-kinase/protein kinase B signal transduction |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005886 | Cellular component | plasma membrane |
GO_0016459 | Cellular component | myosin complex |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0003774 | Molecular function | cytoskeletal motor activity |
GO_0051015 | Molecular function | actin filament binding |
GO_0005515 | Molecular function | protein binding |
GO_0005524 | Molecular function | ATP binding |
GO_0019903 | Molecular function | protein phosphatase binding |
Gene name | MYO16 |
Protein name | Unconventional myosin-XVI (Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3) (Unconventional myosin-16) Myosin XVI |
Synonyms | KIAA0865 MYO16B NYAP3 |
Description | FUNCTION: Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. May be involved in targeting of the catalytic subunit of protein phosphatase 1 during brain development. Activates PI3K and concomitantly recruits the WAVE1 complex to the close vicinity of PI3K and regulates neuronal morphogenesis (By similarity). . |
Accessions | F8W883 ENST00000457511.7 ENST00000356711.7 [Q9Y6X6-1] Q9Y6X6 ENST00000251041.10 [Q9Y6X6-3] |