Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 49 studies | 63% ± 22% | |
classical monocyte | 29 studies | 66% ± 18% | |
conventional dendritic cell | 28 studies | 53% ± 16% | |
monocyte | 24 studies | 53% ± 19% | |
dendritic cell | 22 studies | 49% ± 18% | |
non-classical monocyte | 20 studies | 36% ± 13% | |
plasmacytoid dendritic cell | 19 studies | 54% ± 12% | |
myeloid cell | 16 studies | 54% ± 19% | |
microglial cell | 10 studies | 40% ± 21% | |
mononuclear phagocyte | 8 studies | 57% ± 18% | |
alveolar macrophage | 7 studies | 26% ± 4% | |
neutrophil | 7 studies | 50% ± 12% | |
leukocyte | 7 studies | 39% ± 11% | |
intermediate monocyte | 6 studies | 58% ± 17% | |
endothelial cell of sinusoid | 5 studies | 44% ± 16% | |
monocyte-derived dendritic cell | 3 studies | 69% ± 8% | |
endothelial cell | 3 studies | 42% ± 32% | |
tissue-resident macrophage | 3 studies | 75% ± 11% | |
inflammatory macrophage | 3 studies | 62% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 96% | 1968.62 | 440 / 459 | 95% | 25.03 | 1066 / 1118 |
lung | 98% | 3434.68 | 565 / 578 | 91% | 26.47 | 1050 / 1155 |
intestine | 98% | 2303.69 | 943 / 966 | 71% | 11.50 | 376 / 527 |
bladder | 95% | 1556.48 | 20 / 21 | 68% | 15.16 | 343 / 504 |
prostate | 85% | 1152.01 | 208 / 245 | 76% | 9.23 | 384 / 502 |
adrenal gland | 97% | 2449.01 | 249 / 258 | 61% | 9.19 | 140 / 230 |
thymus | 70% | 873.59 | 457 / 653 | 82% | 14.35 | 499 / 605 |
liver | 83% | 1460.79 | 187 / 226 | 66% | 9.89 | 269 / 406 |
kidney | 58% | 903.46 | 52 / 89 | 90% | 36.37 | 814 / 901 |
uterus | 72% | 737.80 | 122 / 170 | 76% | 13.48 | 349 / 459 |
stomach | 70% | 886.32 | 252 / 359 | 73% | 14.58 | 210 / 286 |
esophagus | 79% | 1279.29 | 1142 / 1445 | 64% | 9.32 | 118 / 183 |
pancreas | 36% | 328.19 | 117 / 328 | 90% | 25.91 | 160 / 178 |
ovary | 46% | 499.56 | 83 / 180 | 76% | 14.24 | 327 / 430 |
skin | 37% | 325.42 | 676 / 1809 | 80% | 21.60 | 379 / 472 |
brain | 26% | 314.22 | 675 / 2642 | 79% | 28.37 | 559 / 705 |
spleen | 100% | 10817.11 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 3976.44 | 1187 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 42.12 | 27 / 29 |
tonsil | 0% | 0 | 0 / 0 | 89% | 18.97 | 40 / 45 |
blood vessel | 86% | 1933.61 | 1145 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 81% | 7209.69 | 752 / 929 | 0% | 0 | 0 / 0 |
heart | 70% | 872.97 | 602 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 34% | 4.97 | 27 / 80 |
muscle | 18% | 130.16 | 147 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | MS4A6A |
Protein name | Membrane-spanning 4-domains subfamily A member 6A (CD20 antigen-like 3) (Four-span transmembrane protein 3) Membrane-spanning 4-domains, subfamily A, member 6A Membrane spanning 4-domains A6A Membrane spanning 4-domains A6A (Membrane-spanning 4-domains, subfamily A, member 6A, isoform CRA_c) |
Synonyms | hCG_40405 CDA01 MS4A6 CD20L3 MSTP090 4SPAN3 |
Description | FUNCTION: May be involved in signal transduction as a component of a multimeric receptor complex. |
Accessions | E9PL03 ENST00000529054.5 E9PNG6 ENST00000528851.6 [Q9H2W1-2] ENST00000412309.6 [Q9H2W1-5] ENST00000527254.5 ENST00000533989.5 ENST00000534596.5 ENST00000533023.5 ENST00000533409.1 Q9H2W1 Q32NC2 H0YEM2 E9PSA9 ENST00000420732.6 [Q9H2W1-3] ENST00000531531.1 E9PJ78 ENST00000530839.5 [Q9H2W1-1] E9PMN8 G5EA21 ENST00000426738.6 [Q9H2W1-5] ENST00000532169.5 [Q9H2W1-4] |