Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| type I pneumocyte | 8 studies | 22% ± 7% | |
| endothelial cell of artery | 6 studies | 23% ± 7% | |
| adipocyte | 5 studies | 26% ± 12% | |
| endothelial cell | 4 studies | 24% ± 5% | |
| astrocyte | 4 studies | 25% ± 12% | |
| basal cell | 3 studies | 31% ± 14% | |
| vein endothelial cell | 3 studies | 42% ± 26% | |
| type II pneumocyte | 3 studies | 19% ± 4% |
Insufficient scRNA-seq data for expression of MMP28 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| thymus | 95% | 775.53 | 619 / 653 | 83% | 12.21 | 505 / 605 |
| bladder | 100% | 1774.33 | 21 / 21 | 77% | 38.71 | 388 / 504 |
| brain | 75% | 830.09 | 1990 / 2642 | 97% | 21.64 | 681 / 705 |
| esophagus | 100% | 1661.66 | 1439 / 1445 | 70% | 20.06 | 129 / 183 |
| intestine | 99% | 1580.30 | 952 / 966 | 66% | 11.65 | 349 / 527 |
| lung | 97% | 1688.41 | 563 / 578 | 67% | 22.50 | 773 / 1155 |
| prostate | 85% | 639.39 | 208 / 245 | 69% | 6.74 | 344 / 502 |
| breast | 90% | 1063.68 | 414 / 459 | 51% | 4.54 | 570 / 1118 |
| uterus | 73% | 516.06 | 124 / 170 | 67% | 33.79 | 307 / 459 |
| stomach | 73% | 791.13 | 261 / 359 | 64% | 10.77 | 184 / 286 |
| ureter | 0% | 0 | 0 / 0 | 100% | 84.20 | 1 / 1 |
| pancreas | 2% | 6.88 | 6 / 328 | 96% | 61.72 | 171 / 178 |
| adipose | 98% | 1636.43 | 1178 / 1204 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 91% | 79.00 | 41 / 45 |
| skin | 72% | 1680.64 | 1305 / 1809 | 15% | 1.62 | 71 / 472 |
| blood vessel | 84% | 822.87 | 1116 / 1335 | 0% | 0 | 0 / 0 |
| kidney | 31% | 119.31 | 28 / 89 | 43% | 4.34 | 385 / 901 |
| adrenal gland | 20% | 79.73 | 52 / 258 | 25% | 2.53 | 58 / 230 |
| ovary | 13% | 66.39 | 23 / 180 | 30% | 2.97 | 131 / 430 |
| heart | 33% | 166.88 | 287 / 861 | 0% | 0 | 0 / 0 |
| muscle | 12% | 45.96 | 100 / 803 | 0% | 0 | 0 / 0 |
| liver | 0% | 0 | 0 / 226 | 10% | 1.67 | 40 / 406 |
| spleen | 5% | 17.55 | 11 / 241 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 3% | 0.22 | 1 / 29 |
| eye | 0% | 0 | 0 / 0 | 1% | 0.12 | 1 / 80 |
| peripheral blood | 0% | 2.10 | 4 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0030198 | Biological process | extracellular matrix organization |
| GO_0030574 | Biological process | collagen catabolic process |
| GO_0010760 | Biological process | negative regulation of macrophage chemotaxis |
| GO_0006508 | Biological process | proteolysis |
| GO_0005615 | Cellular component | extracellular space |
| GO_0062023 | Cellular component | collagen-containing extracellular matrix |
| GO_0031012 | Cellular component | extracellular matrix |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0004222 | Molecular function | metalloendopeptidase activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0008270 | Molecular function | zinc ion binding |
| Gene name | MMP28 |
| Protein name | MMP28 protein (Matrix metallopeptidase 28) (Matrix metalloproteinase-28) Matrix metallopeptidase 28 Matrix metallopeptidase 28 (Matrix metalloproteinase-28) Matrix metalloproteinase-28 Matrix metalloproteinase-28 (MMP-28) (EC 3.4.24.-) (Epilysin) |
| Synonyms | MMP25 UNQ1893/PRO4339 hCG_1989249 |
| Description | FUNCTION: Can degrade casein. Could play a role in tissues homeostasis and repair. |
| Accessions | ENST00000619655.4 ENST00000612292.1 A0A0J9YW29 ENST00000632913.1 ENST00000631999.1 ENST00000613289.2 ENST00000605424.6 [Q9H239-1] ENST00000632360.1 [Q9H239-2] A0A087WZ56 A0A087X1Y9 ENST00000615317.4 ENST00000611911.4 [Q9H239-1] C0H5X0 Q9H239 ENST00000615136.4 ENST00000634159.1 B3KV06 ENST00000612672.1 [Q9H239-2] |
