Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 10 studies | 23% ± 6% | |
glutamatergic neuron | 8 studies | 41% ± 26% | |
GABAergic neuron | 7 studies | 36% ± 19% | |
oligodendrocyte precursor cell | 6 studies | 29% ± 12% | |
astrocyte | 5 studies | 32% ± 11% | |
oligodendrocyte | 5 studies | 27% ± 8% | |
macrophage | 5 studies | 22% ± 3% | |
interneuron | 5 studies | 37% ± 21% | |
neuron | 4 studies | 30% ± 7% | |
epithelial cell | 4 studies | 22% ± 5% | |
adipocyte | 4 studies | 20% ± 3% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 3% | |
fibroblast | 4 studies | 19% ± 4% | |
monocyte | 3 studies | 17% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 38% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1627.81 | 180 / 180 | 100% | 13.33 | 430 / 430 |
prostate | 100% | 1641.98 | 245 / 245 | 100% | 30.68 | 502 / 502 |
brain | 100% | 1774.99 | 2641 / 2642 | 100% | 23.68 | 705 / 705 |
bladder | 100% | 1822.76 | 21 / 21 | 100% | 15.14 | 502 / 504 |
thymus | 100% | 1553.70 | 653 / 653 | 100% | 19.69 | 602 / 605 |
esophagus | 100% | 1475.73 | 1445 / 1445 | 99% | 13.53 | 182 / 183 |
lung | 100% | 1398.29 | 577 / 578 | 100% | 14.79 | 1150 / 1155 |
breast | 100% | 1708.57 | 459 / 459 | 99% | 21.87 | 1111 / 1118 |
adrenal gland | 100% | 1657.03 | 258 / 258 | 99% | 24.69 | 228 / 230 |
kidney | 100% | 1188.85 | 89 / 89 | 99% | 16.48 | 893 / 901 |
intestine | 100% | 1434.53 | 966 / 966 | 99% | 16.05 | 520 / 527 |
stomach | 100% | 1093.27 | 359 / 359 | 98% | 14.34 | 281 / 286 |
pancreas | 99% | 664.00 | 324 / 328 | 99% | 14.79 | 177 / 178 |
uterus | 100% | 1898.47 | 170 / 170 | 98% | 16.34 | 448 / 459 |
skin | 100% | 1601.32 | 1809 / 1809 | 97% | 19.30 | 459 / 472 |
liver | 100% | 798.17 | 226 / 226 | 91% | 7.22 | 369 / 406 |
adipose | 100% | 1730.46 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2082.29 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1289.09 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.37 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.25 | 1 / 1 |
muscle | 98% | 644.92 | 783 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 730.23 | 838 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 11.76 | 28 / 29 |
eye | 0% | 0 | 0 / 0 | 94% | 12.85 | 75 / 80 |
peripheral blood | 64% | 465.01 | 598 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006915 | Biological process | apoptotic process |
GO_0006508 | Biological process | proteolysis |
GO_0005654 | Cellular component | nucleoplasm |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005515 | Molecular function | protein binding |
GO_0004843 | Molecular function | cysteine-type deubiquitinase activity |
GO_1990380 | Molecular function | K48-linked deubiquitinase activity |
Gene name | MINDY3 |
Protein name | Ubiquitin carboxyl-terminal hydrolase MINDY-3 (EC 3.4.19.12) (Dermal papilla-derived protein 5) (Deubiquitinating enzyme MINDY-3) (Protein CARP) Ubiquitin carboxyl-terminal hydrolase MINDY (EC 3.4.19.12) |
Synonyms | MSTP126 My042 FAM188A DERP5 CARP C10orf97 |
Description | FUNCTION: Hydrolase that can remove 'Lys-48'-linked conjugated ubiquitin from proteins. . FUNCTION: Hydrolase that can remove 'Lys-48'-linked conjugated ubiquitin from proteins. . FUNCTION: Hydrolase that can remove 'Lys-48'-linked conjugated ubiquitin from proteins. . FUNCTION: Hydrolase that can remove 'Lys-48'-linked conjugated ubiquitin from proteins. . |
Accessions | Q9H8M7 ENST00000436829.1 ENST00000418767.5 X6RC30 ENST00000378036.5 X6R9S5 X6RC97 ENST00000277632.8 [Q9H8M7-1] |