Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 19% ± 4% | |
smooth muscle cell | 7 studies | 17% ± 1% | |
epithelial cell | 6 studies | 31% ± 13% | |
fibroblast | 6 studies | 22% ± 6% | |
basal cell | 5 studies | 23% ± 6% | |
glutamatergic neuron | 4 studies | 38% ± 13% | |
GABAergic neuron | 3 studies | 31% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1634.27 | 1445 / 1445 | 100% | 36.54 | 183 / 183 |
ovary | 100% | 1786.59 | 180 / 180 | 100% | 40.62 | 430 / 430 |
breast | 100% | 1273.89 | 459 / 459 | 100% | 34.04 | 1117 / 1118 |
brain | 100% | 1123.97 | 2637 / 2642 | 100% | 25.24 | 705 / 705 |
prostate | 100% | 1550.25 | 245 / 245 | 100% | 23.42 | 501 / 502 |
lung | 100% | 1265.99 | 577 / 578 | 100% | 33.20 | 1154 / 1155 |
adrenal gland | 100% | 1889.15 | 258 / 258 | 100% | 32.42 | 229 / 230 |
uterus | 100% | 1763.15 | 170 / 170 | 100% | 34.23 | 457 / 459 |
thymus | 100% | 1426.61 | 653 / 653 | 99% | 27.53 | 601 / 605 |
bladder | 100% | 1568.14 | 21 / 21 | 99% | 25.98 | 500 / 504 |
intestine | 100% | 1306.64 | 966 / 966 | 99% | 24.89 | 520 / 527 |
stomach | 100% | 1033.72 | 359 / 359 | 99% | 26.43 | 282 / 286 |
kidney | 100% | 1557.66 | 89 / 89 | 99% | 22.96 | 888 / 901 |
pancreas | 97% | 544.77 | 319 / 328 | 99% | 24.72 | 177 / 178 |
skin | 100% | 1168.12 | 1807 / 1809 | 96% | 21.69 | 455 / 472 |
liver | 92% | 422.97 | 208 / 226 | 89% | 10.72 | 360 / 406 |
blood vessel | 100% | 1838.57 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.93 | 29 / 29 |
muscle | 100% | 1295.34 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 752.41 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.57 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.90 | 1 / 1 |
adipose | 100% | 1272.64 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 1227.76 | 840 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 88% | 12.26 | 70 / 80 |
peripheral blood | 71% | 539.17 | 659 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0016567 | Biological process | protein ubiquitination |
GO_0001824 | Biological process | blastocyst development |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0035019 | Biological process | somatic stem cell population maintenance |
GO_0032968 | Biological process | positive regulation of transcription elongation by RNA polymerase II |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0016592 | Cellular component | mediator complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0070847 | Cellular component | core mediator complex |
GO_0005634 | Cellular component | nucleus |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0005515 | Molecular function | protein binding |
GO_0003712 | Molecular function | transcription coregulator activity |
GO_0003899 | Molecular function | DNA-directed 5'-3' RNA polymerase activity |
Gene name | MED21 |
Protein name | Mediator complex subunit 21 Mediator of RNA polymerase II transcription subunit 21 Mediator of RNA polymerase II transcription subunit 21 (Mediator complex subunit 21) (RNA polymerase II holoenzyme component SRB7) (RNAPII complex component SRB7) (hSrb7) |
Synonyms | SURB7 SRB7 |
Description | FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . |
Accessions | ENST00000546323.5 F5H872 Q13503 A0A0S2Z545 A0A024RAW0 F5GZQ1 ENST00000536711.5 ENST00000282892.4 |