Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 22% ± 5% | |
B cell | 4 studies | 21% ± 6% | |
epithelial cell | 3 studies | 38% ± 6% | |
GABAergic neuron | 3 studies | 34% ± 9% | |
glutamatergic neuron | 3 studies | 41% ± 11% | |
astrocyte | 3 studies | 21% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 29% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 2024.64 | 653 / 653 | 76% | 1.12 | 460 / 605 |
brain | 99% | 1131.40 | 2622 / 2642 | 54% | 0.71 | 378 / 705 |
prostate | 100% | 1857.32 | 245 / 245 | 50% | 0.63 | 250 / 502 |
kidney | 100% | 1344.01 | 89 / 89 | 42% | 0.59 | 374 / 901 |
esophagus | 100% | 1593.49 | 1445 / 1445 | 40% | 0.57 | 74 / 183 |
breast | 100% | 1889.93 | 459 / 459 | 38% | 0.54 | 429 / 1118 |
stomach | 100% | 1280.52 | 359 / 359 | 38% | 0.56 | 109 / 286 |
pancreas | 99% | 878.73 | 326 / 328 | 38% | 0.48 | 68 / 178 |
intestine | 100% | 1755.55 | 966 / 966 | 36% | 0.47 | 192 / 527 |
bladder | 100% | 1887.71 | 21 / 21 | 34% | 0.52 | 169 / 504 |
lung | 100% | 1414.27 | 577 / 578 | 33% | 0.51 | 383 / 1155 |
skin | 100% | 1942.72 | 1809 / 1809 | 21% | 0.29 | 101 / 472 |
uterus | 100% | 2299.29 | 170 / 170 | 21% | 0.29 | 97 / 459 |
ovary | 100% | 2684.86 | 180 / 180 | 14% | 0.18 | 61 / 430 |
adrenal gland | 100% | 1345.77 | 258 / 258 | 10% | 0.12 | 23 / 230 |
liver | 100% | 679.47 | 226 / 226 | 7% | 0.10 | 30 / 406 |
adipose | 100% | 1755.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1539.82 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1973.45 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 99% | 860.82 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1114.65 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 1082.41 | 834 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 31% | 0.38 | 9 / 29 |
eye | 0% | 0 | 0 / 0 | 11% | 0.14 | 9 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0032968 | Biological process | positive regulation of transcription elongation by RNA polymerase II |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006367 | Biological process | transcription initiation at RNA polymerase II promoter |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0035019 | Biological process | somatic stem cell population maintenance |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0016592 | Cellular component | mediator complex |
GO_0016020 | Cellular component | membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0070847 | Cellular component | core mediator complex |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0005634 | Cellular component | nucleus |
GO_0046966 | Molecular function | nuclear thyroid hormone receptor binding |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0003712 | Molecular function | transcription coregulator activity |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0042809 | Molecular function | nuclear vitamin D receptor binding |
GO_0030374 | Molecular function | nuclear receptor coactivator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | MED17 |
Protein name | Cofactor required for Sp1 transcriptional activation subunit 6 Mediator of RNA polymerase II transcription subunit 17 (Mediator complex subunit 17) Mediator complex subunit 17 Mediator of RNA polymerase II transcription subunit 17 (Activator-recruited cofactor 77 kDa component) (ARC77) (Cofactor required for Sp1 transcriptional activation subunit 6) (CRSP complex subunit 6) (Mediator complex subunit 17) (Thyroid hormone receptor-associated protein complex 80 kDa component) (Trap80) (Transcriptional coactivator CRSP77) (Vitamin D3 receptor-interacting protein complex 80 kDa component) (DRIP80) |
Synonyms | TRAP80 DRIP80 CRSP6 ARC77 DRIP77 |
Description | FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. . |
Accessions | A0A1W2PS69 Q9NVC6 A0A1W2PRS0 A0A1W2PRX4 ENST00000638487.1 ENST00000251871.9 [Q9NVC6-1] ENST00000640473.1 ENST00000528786.2 ENST00000533359.5 E9PKQ4 ENST00000638294.1 ENST00000639596.1 A0A1W2PS27 B4DSE1 ENST00000533133.6 ENST00000638518.1 A0A1W2PPJ7 ENST00000639457.1 E9PM72 ENST00000639724.1 A0A1W2PQ48 A0A1W2PR99 ENST00000640077.1 A0A1W2PPC8 A0A1W2PQE4 A0A1W2PNW7 ENST00000640027.1 ENST00000640451.1 ENST00000639189.1 A0A384NYG5 ENST00000638790.1 E9PJZ4 A0A1W2PPP8 ENST00000639523.1 ENST00000640521.1 A0A1W2PNF3 |