Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasmacytoid dendritic cell | 20 studies | 55% ± 12% | |
ciliated cell | 14 studies | 34% ± 13% | |
oligodendrocyte | 13 studies | 29% ± 10% | |
glutamatergic neuron | 9 studies | 41% ± 13% | |
fibroblast | 7 studies | 25% ± 9% | |
astrocyte | 6 studies | 30% ± 15% | |
GABAergic neuron | 6 studies | 40% ± 14% | |
neuron | 5 studies | 38% ± 10% | |
amacrine cell | 5 studies | 31% ± 11% | |
retinal ganglion cell | 5 studies | 81% ± 27% | |
endothelial cell | 4 studies | 29% ± 11% | |
platelet | 4 studies | 23% ± 7% | |
retina horizontal cell | 4 studies | 46% ± 9% | |
oligodendrocyte precursor cell | 4 studies | 29% ± 9% | |
interneuron | 4 studies | 45% ± 17% | |
megakaryocyte | 3 studies | 31% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 43038.35 | 2640 / 2642 | 100% | 155.24 | 704 / 705 |
esophagus | 59% | 3468.58 | 849 / 1445 | 46% | 5.88 | 85 / 183 |
breast | 30% | 1222.53 | 137 / 459 | 72% | 8.83 | 804 / 1118 |
bladder | 76% | 5636.57 | 16 / 21 | 25% | 3.29 | 126 / 504 |
intestine | 64% | 5067.15 | 619 / 966 | 32% | 3.91 | 171 / 527 |
adrenal gland | 8% | 372.21 | 20 / 258 | 81% | 66.21 | 187 / 230 |
uterus | 57% | 2646.12 | 97 / 170 | 31% | 6.95 | 143 / 459 |
skin | 35% | 3127.33 | 628 / 1809 | 46% | 6.29 | 219 / 472 |
blood vessel | 81% | 4180.55 | 1082 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 80% | 11.09 | 142 / 178 |
prostate | 33% | 1643.26 | 82 / 245 | 46% | 4.11 | 231 / 502 |
stomach | 27% | 1570.22 | 96 / 359 | 46% | 6.49 | 132 / 286 |
heart | 69% | 4440.87 | 591 / 861 | 0% | 0 | 0 / 0 |
thymus | 28% | 1099.11 | 186 / 653 | 39% | 8.81 | 238 / 605 |
ovary | 21% | 753.89 | 37 / 180 | 43% | 4.71 | 183 / 430 |
lung | 5% | 221.51 | 31 / 578 | 50% | 7.01 | 579 / 1155 |
kidney | 0% | 0 | 0 / 89 | 40% | 4.19 | 364 / 901 |
adipose | 39% | 1893.50 | 467 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 34% | 5.24 | 27 / 80 |
tonsil | 0% | 0 | 0 / 0 | 13% | 1.16 | 6 / 45 |
muscle | 10% | 517.62 | 79 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.37 | 2 / 29 |
liver | 0% | 0 | 0 / 226 | 4% | 0.53 | 16 / 406 |
peripheral blood | 0% | 10.61 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0050882 | Biological process | voluntary musculoskeletal movement |
GO_0032435 | Biological process | negative regulation of proteasomal ubiquitin-dependent protein catabolic process |
GO_0008306 | Biological process | associative learning |
GO_1990535 | Biological process | neuron projection maintenance |
GO_2000010 | Biological process | positive regulation of protein localization to cell surface |
GO_0031114 | Biological process | regulation of microtubule depolymerization |
GO_0007409 | Biological process | axonogenesis |
GO_0070050 | Biological process | neuron cellular homeostasis |
GO_0048167 | Biological process | regulation of synaptic plasticity |
GO_1902817 | Biological process | negative regulation of protein localization to microtubule |
GO_0099642 | Biological process | retrograde axonal protein transport |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0007613 | Biological process | memory |
GO_1903829 | Biological process | positive regulation of protein localization |
GO_0016358 | Biological process | dendrite development |
GO_0099641 | Biological process | anterograde axonal protein transport |
GO_0150001 | Cellular component | primary dendrite |
GO_0005874 | Cellular component | microtubule |
GO_0043198 | Cellular component | dendritic shaft |
GO_0043194 | Cellular component | axon initial segment |
GO_0043025 | Cellular component | neuronal cell body |
GO_0043005 | Cellular component | neuron projection |
GO_0030425 | Cellular component | dendrite |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0005737 | Cellular component | cytoplasm |
GO_0030424 | Cellular component | axon |
GO_0044307 | Cellular component | dendritic branch |
GO_0005875 | Cellular component | microtubule associated complex |
GO_1901588 | Cellular component | dendritic microtubule |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0015631 | Molecular function | tubulin binding |
GO_0005198 | Molecular function | structural molecule activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0048156 | Molecular function | tau protein binding |
GO_0008093 | Molecular function | cytoskeletal anchor activity |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | MAP1A |
Protein name | MAP1A protein Microtubule associated protein 1A Microtubule-associated protein 1A (MAP-1A) (Proliferation-related protein p80) [Cleaved into: MAP1A heavy chain; MAP1 light chain LC2] |
Synonyms | MAP1L |
Description | FUNCTION: Structural protein involved in the filamentous cross-bridging between microtubules and other skeletal elements. |
Accessions | P78559 Q504X9 E9PGC8 ENST00000382031.5 ENST00000300231.6 [P78559-1] Q7Z5F9 |