Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 8 studies | 37% ± 19% | |
| oligodendrocyte precursor cell | 8 studies | 27% ± 10% | |
| astrocyte | 8 studies | 24% ± 8% | |
| oligodendrocyte | 8 studies | 22% ± 6% | |
| GABAergic neuron | 7 studies | 36% ± 20% | |
| neuron | 4 studies | 33% ± 6% | |
| interneuron | 4 studies | 41% ± 20% | |
| GABAergic interneuron | 3 studies | 20% ± 1% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 11 studies | 28% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 9541.26 | 2642 / 2642 | 100% | 123.00 | 702 / 705 |
| uterus | 72% | 2104.99 | 123 / 170 | 15% | 4.88 | 68 / 459 |
| eye | 0% | 0 | 0 / 0 | 79% | 17.44 | 63 / 80 |
| adrenal gland | 8% | 139.47 | 21 / 258 | 64% | 54.55 | 147 / 230 |
| blood vessel | 57% | 987.37 | 762 / 1335 | 0% | 0 | 0 / 0 |
| bladder | 43% | 573.00 | 9 / 21 | 4% | 0.84 | 21 / 504 |
| ovary | 26% | 325.67 | 46 / 180 | 19% | 2.87 | 82 / 430 |
| lung | 36% | 431.05 | 208 / 578 | 8% | 1.01 | 98 / 1155 |
| skin | 0% | 3.12 | 6 / 1809 | 38% | 9.45 | 177 / 472 |
| esophagus | 16% | 188.40 | 235 / 1445 | 14% | 1.13 | 25 / 183 |
| stomach | 6% | 63.73 | 23 / 359 | 15% | 1.61 | 42 / 286 |
| kidney | 0% | 0 | 0 / 89 | 20% | 1.84 | 183 / 901 |
| prostate | 13% | 148.50 | 31 / 245 | 8% | 2.61 | 38 / 502 |
| intestine | 8% | 82.05 | 80 / 966 | 6% | 0.45 | 30 / 527 |
| lymph node | 0% | 0 | 0 / 0 | 14% | 0.75 | 4 / 29 |
| thymus | 4% | 42.20 | 28 / 653 | 8% | 0.55 | 47 / 605 |
| pancreas | 0% | 0 | 0 / 328 | 9% | 3.83 | 16 / 178 |
| tonsil | 0% | 0 | 0 / 0 | 9% | 0.53 | 4 / 45 |
| adipose | 7% | 86.02 | 90 / 1204 | 0% | 0 | 0 / 0 |
| breast | 3% | 32.12 | 15 / 459 | 1% | 0.16 | 16 / 1118 |
| liver | 0% | 0 | 0 / 226 | 1% | 0.09 | 6 / 406 |
| heart | 0% | 2.25 | 2 / 861 | 0% | 0 | 0 / 0 |
| muscle | 0% | 1.08 | 1 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0099560 | Biological process | synaptic membrane adhesion |
| GO_1905606 | Biological process | regulation of presynapse assembly |
| GO_0051965 | Biological process | positive regulation of synapse assembly |
| GO_0099151 | Biological process | regulation of postsynaptic density assembly |
| GO_0098978 | Cellular component | glutamatergic synapse |
| GO_0098839 | Cellular component | postsynaptic density membrane |
| GO_0044300 | Cellular component | cerebellar mossy fiber |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0042734 | Cellular component | presynaptic membrane |
| GO_0005102 | Molecular function | signaling receptor binding |
| Gene name | LRRC4B |
| Protein name | Leucine-rich repeat-containing protein 4B (Netrin-G3 ligand) (NGL-3) LRRC4B protein Leucine rich repeat containing 4B |
| Synonyms | LRIG4 |
| Description | FUNCTION: Synaptic adhesion protein. Regulates the formation of excitatory synapses. The trans-synaptic adhesion between LRRC4B and PTPRF regulates the formation of excitatory synapses in a bidirectional manner (By similarity). . |
| Accessions | A0PJJ4 ENST00000599957.5 ENST00000600381.1 M0R2G0 Q9NT99 ENST00000652263.1 A2VDK1 ENST00000389201.7 |
