Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 30 studies | 48% ± 21% | |
macrophage | 18 studies | 58% ± 29% | |
astrocyte | 14 studies | 42% ± 21% | |
mast cell | 13 studies | 65% ± 20% | |
microglial cell | 12 studies | 87% ± 10% | |
fibroblast | 11 studies | 36% ± 14% | |
oligodendrocyte precursor cell | 10 studies | 51% ± 17% | |
pericyte | 9 studies | 32% ± 15% | |
endothelial cell of lymphatic vessel | 9 studies | 66% ± 22% | |
adipocyte | 8 studies | 55% ± 20% | |
mesothelial cell | 8 studies | 43% ± 20% | |
myeloid cell | 8 studies | 65% ± 23% | |
capillary endothelial cell | 7 studies | 39% ± 22% | |
dendritic cell | 7 studies | 52% ± 18% | |
ciliated cell | 7 studies | 34% ± 11% | |
smooth muscle cell | 7 studies | 35% ± 10% | |
classical monocyte | 6 studies | 23% ± 5% | |
vein endothelial cell | 6 studies | 60% ± 29% | |
monocyte | 6 studies | 70% ± 24% | |
GABAergic neuron | 5 studies | 36% ± 13% | |
cardiac muscle cell | 5 studies | 42% ± 7% | |
endothelial cell of artery | 5 studies | 47% ± 28% | |
type II pneumocyte | 5 studies | 69% ± 17% | |
basal cell | 4 studies | 37% ± 16% | |
club cell | 4 studies | 42% ± 22% | |
type I pneumocyte | 4 studies | 59% ± 10% | |
hematopoietic precursor cell | 3 studies | 45% ± 30% | |
glutamatergic neuron | 3 studies | 35% ± 16% | |
endocardial cell | 3 studies | 46% ± 21% | |
mononuclear phagocyte | 3 studies | 51% ± 20% | |
epithelial cell | 3 studies | 33% ± 13% | |
Mueller cell | 3 studies | 47% ± 12% | |
Schwann cell | 3 studies | 40% ± 10% | |
endothelial cell of vascular tree | 3 studies | 71% ± 12% | |
retinal pigment epithelial cell | 3 studies | 76% ± 17% | |
alveolar macrophage | 3 studies | 86% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 423.58 | 89 / 89 | 98% | 6.95 | 883 / 901 |
liver | 100% | 281.04 | 226 / 226 | 98% | 6.94 | 396 / 406 |
thymus | 100% | 479.57 | 652 / 653 | 97% | 8.70 | 587 / 605 |
ovary | 100% | 345.41 | 180 / 180 | 95% | 8.13 | 410 / 430 |
prostate | 100% | 321.47 | 244 / 245 | 91% | 5.80 | 458 / 502 |
pancreas | 100% | 209.12 | 327 / 328 | 84% | 3.64 | 150 / 178 |
lung | 100% | 349.16 | 577 / 578 | 69% | 3.10 | 792 / 1155 |
bladder | 95% | 165.76 | 20 / 21 | 71% | 3.85 | 358 / 504 |
uterus | 99% | 192.31 | 169 / 170 | 66% | 3.39 | 303 / 459 |
skin | 69% | 74.39 | 1243 / 1809 | 92% | 8.08 | 433 / 472 |
adrenal gland | 100% | 1372.69 | 258 / 258 | 54% | 4.84 | 125 / 230 |
breast | 100% | 277.91 | 459 / 459 | 51% | 2.06 | 572 / 1118 |
stomach | 99% | 284.69 | 354 / 359 | 47% | 1.98 | 133 / 286 |
brain | 94% | 171.25 | 2488 / 2642 | 50% | 1.83 | 353 / 705 |
intestine | 97% | 183.62 | 941 / 966 | 40% | 1.56 | 212 / 527 |
esophagus | 86% | 186.89 | 1241 / 1445 | 27% | 0.86 | 49 / 183 |
adipose | 100% | 379.67 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 25.79 | 80 / 80 |
spleen | 100% | 509.05 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 99% | 420.28 | 850 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 97% | 290.69 | 1301 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 81% | 143.86 | 757 / 929 | 0% | 0 | 0 / 0 |
muscle | 69% | 86.09 | 556 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 1.95 | 17 / 29 |
tonsil | 0% | 0 | 0 / 0 | 20% | 0.62 | 9 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030318 | Biological process | melanocyte differentiation |
Gene name | LRMDA |
Protein name | Leucine-rich melanocyte differentiation-associated protein Leucine rich melanocyte differentiation associated |
Synonyms | C10orf11 CDA017 |
Description | FUNCTION: Required for melanocyte differentiation. . |
Accessions | Q9H2I8 ENST00000372499.5 M0R2H0 A0A087WWI0 ENST00000496424.2 ENST00000611255.5 |