Insufficient scRNA-seq data for expression of LRFN4 at single-cell level.
Insufficient scRNA-seq data for expression of LRFN4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 99% | 662.37 | 1436 / 1445 | 99% | 31.26 | 182 / 183 |
brain | 99% | 1380.92 | 2616 / 2642 | 100% | 27.23 | 703 / 705 |
ovary | 98% | 471.91 | 176 / 180 | 100% | 33.34 | 430 / 430 |
intestine | 99% | 834.94 | 960 / 966 | 98% | 32.45 | 516 / 527 |
stomach | 99% | 511.80 | 354 / 359 | 98% | 33.12 | 279 / 286 |
skin | 100% | 872.95 | 1805 / 1809 | 91% | 17.29 | 431 / 472 |
uterus | 100% | 916.09 | 170 / 170 | 91% | 20.05 | 418 / 459 |
breast | 100% | 1023.83 | 458 / 459 | 88% | 15.79 | 982 / 1118 |
lung | 98% | 703.15 | 569 / 578 | 89% | 16.67 | 1027 / 1155 |
bladder | 100% | 745.10 | 21 / 21 | 85% | 22.23 | 428 / 504 |
adrenal gland | 100% | 953.68 | 258 / 258 | 70% | 7.41 | 161 / 230 |
prostate | 99% | 743.10 | 243 / 245 | 56% | 4.24 | 282 / 502 |
kidney | 99% | 663.54 | 88 / 89 | 46% | 5.06 | 415 / 901 |
thymus | 98% | 498.00 | 639 / 653 | 43% | 3.88 | 262 / 605 |
pancreas | 27% | 73.39 | 90 / 328 | 89% | 17.15 | 158 / 178 |
spleen | 100% | 609.34 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 37.53 | 1 / 1 |
adipose | 100% | 1103.02 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 661.01 | 1320 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 553.38 | 842 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 12.81 | 42 / 45 |
lymph node | 0% | 0 | 0 / 0 | 93% | 9.43 | 27 / 29 |
muscle | 92% | 425.45 | 742 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 9.83 | 68 / 80 |
peripheral blood | 51% | 227.25 | 470 / 929 | 0% | 0 | 0 / 0 |
liver | 18% | 52.05 | 41 / 226 | 17% | 2.50 | 67 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0099560 | Biological process | synaptic membrane adhesion |
GO_1905606 | Biological process | regulation of presynapse assembly |
GO_0099151 | Biological process | regulation of postsynaptic density assembly |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0009986 | Cellular component | cell surface |
GO_0098839 | Cellular component | postsynaptic density membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | LRFN4 |
Protein name | Leucine-rich repeat and fibronectin type-III domain-containing protein 4 Leucine rich repeat and fibronectin type III domain containing 4 LRFN4 protein |
Synonyms | SALM3 |
Description | FUNCTION: Promotes neurite outgrowth in hippocampal neurons. May play a role in redistributing DLG4 to the cell periphery (By similarity). . |
Accessions | ENST00000309602.5 Q6PJG9 Q6IPL6 Q7L3C2 E7ENX6 Q6PK41 ENST00000393952.3 |