Insufficient scRNA-seq data for expression of LHX9 at single-cell level.
Insufficient scRNA-seq data for expression of LHX9 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 925.66 | 180 / 180 | 6% | 0.14 | 24 / 430 |
liver | 68% | 39.14 | 154 / 226 | 15% | 0.54 | 59 / 406 |
blood vessel | 71% | 88.64 | 950 / 1335 | 0% | 0 | 0 / 0 |
heart | 63% | 48.07 | 544 / 861 | 0% | 0 | 0 / 0 |
brain | 23% | 30.67 | 601 / 2642 | 40% | 1.26 | 281 / 705 |
lung | 49% | 45.63 | 281 / 578 | 11% | 0.75 | 123 / 1155 |
uterus | 39% | 17.12 | 67 / 170 | 14% | 1.11 | 65 / 459 |
adrenal gland | 16% | 3.41 | 41 / 258 | 22% | 1.00 | 50 / 230 |
adipose | 32% | 16.84 | 381 / 1204 | 0% | 0 | 0 / 0 |
muscle | 16% | 3.78 | 128 / 803 | 0% | 0 | 0 / 0 |
kidney | 4% | 0.99 | 4 / 89 | 9% | 1.43 | 77 / 901 |
breast | 3% | 1.62 | 15 / 459 | 3% | 0.09 | 29 / 1118 |
esophagus | 2% | 0.68 | 35 / 1445 | 3% | 0.15 | 6 / 183 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.34 | 2 / 45 |
stomach | 1% | 0.31 | 5 / 359 | 2% | 0.04 | 6 / 286 |
spleen | 3% | 0.99 | 8 / 241 | 0% | 0 | 0 / 0 |
skin | 1% | 0.29 | 21 / 1809 | 2% | 0.07 | 9 / 472 |
bladder | 0% | 0 | 0 / 21 | 3% | 0.09 | 15 / 504 |
prostate | 2% | 0.51 | 4 / 245 | 1% | 0.05 | 6 / 502 |
pancreas | 2% | 0.35 | 6 / 328 | 1% | 0.01 | 1 / 178 |
intestine | 1% | 0.19 | 11 / 966 | 1% | 0.01 | 5 / 527 |
eye | 0% | 0 | 0 / 0 | 1% | 0.02 | 1 / 80 |
peripheral blood | 1% | 0.20 | 6 / 929 | 0% | 0 | 0 / 0 |
thymus | 0% | 0.07 | 3 / 653 | 0% | 0.00 | 1 / 605 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008584 | Biological process | male gonad development |
GO_0030182 | Biological process | neuron differentiation |
GO_0035262 | Biological process | gonad morphogenesis |
GO_0008283 | Biological process | cell population proliferation |
GO_0008585 | Biological process | female gonad development |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0097380 | Biological process | dorsal spinal cord interneuron anterior axon guidance |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | LHX9 |
Protein name | LIM homeobox 9 LIM/homeobox protein Lhx9 LIM/homeobox protein Lhx9 (LIM homeobox protein 9) |
Synonyms | hCG_40874 |
Description | FUNCTION: Involved in gonadal development. . |
Accessions | ENST00000367388.4 ENST00000367391.5 [Q9NQ69-3] Q9NQ69 A0A0C4DGY4 ENST00000367387.6 [Q9NQ69-1] ENST00000561173.5 A0A087X083 H0Y330 ENST00000367390.7 [Q9NQ69-2] ENST00000606127.2 ENST00000475727.1 H0YL54 |