Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 15 studies | 43% ± 16% | |
| smooth muscle cell | 12 studies | 29% ± 14% | |
| cardiac muscle cell | 7 studies | 81% ± 25% | |
| pericyte | 6 studies | 30% ± 17% | |
| muscle cell | 3 studies | 48% ± 26% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 68% | 3994.07 | 166 / 245 | 96% | 11.89 | 483 / 502 |
| brain | 30% | 1317.27 | 791 / 2642 | 83% | 5.80 | 582 / 705 |
| muscle | 100% | 103826.35 | 803 / 803 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 1.97 | 1 / 1 |
| heart | 100% | 84962.49 | 860 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 14.70 | 79 / 80 |
| blood vessel | 99% | 10907.63 | 1316 / 1335 | 0% | 0 | 0 / 0 |
| esophagus | 62% | 3828.82 | 891 / 1445 | 31% | 1.21 | 57 / 183 |
| uterus | 66% | 2461.49 | 112 / 170 | 21% | 3.76 | 97 / 459 |
| intestine | 66% | 4198.45 | 641 / 966 | 17% | 0.67 | 89 / 527 |
| skin | 3% | 97.79 | 58 / 1809 | 75% | 10.04 | 356 / 472 |
| thymus | 10% | 316.03 | 64 / 653 | 50% | 1.12 | 303 / 605 |
| stomach | 27% | 1145.68 | 97 / 359 | 30% | 2.15 | 87 / 286 |
| breast | 18% | 582.77 | 84 / 459 | 32% | 0.68 | 360 / 1118 |
| bladder | 24% | 658.33 | 5 / 21 | 19% | 0.78 | 96 / 504 |
| kidney | 2% | 59.24 | 2 / 89 | 38% | 1.11 | 346 / 901 |
| adipose | 38% | 1317.27 | 458 / 1204 | 0% | 0 | 0 / 0 |
| adrenal gland | 0% | 12.22 | 1 / 258 | 36% | 1.38 | 82 / 230 |
| ovary | 17% | 642.23 | 31 / 180 | 18% | 0.49 | 78 / 430 |
| lung | 7% | 249.14 | 41 / 578 | 21% | 1.29 | 239 / 1155 |
| pancreas | 0% | 0 | 0 / 328 | 28% | 1.03 | 49 / 178 |
| tonsil | 0% | 0 | 0 / 0 | 18% | 1.85 | 8 / 45 |
| liver | 0% | 0 | 0 / 226 | 5% | 0.07 | 21 / 406 |
| lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
| peripheral blood | 1% | 67.97 | 10 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| GO_0061061 | Biological process | muscle structure development |
| GO_0045214 | Biological process | sarcomere organization |
| GO_0030036 | Biological process | actin cytoskeleton organization |
| GO_0007507 | Biological process | heart development |
| GO_0031143 | Cellular component | pseudopodium |
| GO_0001725 | Cellular component | stress fiber |
| GO_0005856 | Cellular component | cytoskeleton |
| GO_0005912 | Cellular component | adherens junction |
| GO_0031941 | Cellular component | filamentous actin |
| GO_0048471 | Cellular component | perinuclear region of cytoplasm |
| GO_0030018 | Cellular component | Z disc |
| GO_0005080 | Molecular function | protein kinase C binding |
| GO_0008092 | Molecular function | cytoskeletal protein binding |
| GO_0051371 | Molecular function | muscle alpha-actinin binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003779 | Molecular function | actin binding |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | LDB3 |
| Protein name | LIM domain-binding protein 3 isoform LIM domain binding 3 LIM domain binding 3 isoform 1 (LIM domain binding 3, isoform CRA_h) LIM domain-binding protein 3 (Protein cypher) (Z-band alternatively spliced PDZ-motif protein) LIM domain binding 3 isoform 2 |
| Synonyms | ZASP hCG_23264 KIAA0613 |
| Description | FUNCTION: May function as an adapter in striated muscle to couple protein kinase C-mediated signaling via its LIM domains to the cytoskeleton. . |
| Accessions | A0A8I5KV04 A0A0S2Z521 ENST00000688785.1 ENST00000687856.1 ENST00000372066.8 [O75112-6] ENST00000623007.3 [O75112-5] ENST00000361373.9 [O75112-1] V5T7C5 A0A096LPD7 ENST00000263066.11 [O75112-6] ENST00000429277.7 [O75112-2] A0A0C4DGG7 A0A7R6M6S0 A0A7R6M8Q3 ENST00000689740.1 ENST00000691462.1 ENST00000688001.1 ENST00000542786.2 ENST00000372056.8 [O75112-4] A0A7R6M6S2 ENST00000688678.1 ENST00000689296.1 A0A8I5KX76 O75112 A0A7R6RQ68 ENST00000477489.1 A0A8I5QJN0 A0A0S2Z501 ENST00000693680.1 ENST00000623056.4 [O75112-7] A0A0S2Z530 |
