Insufficient scRNA-seq data for expression of LBX1 at single-cell level.
Insufficient scRNA-seq data for expression of LBX1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
muscle | 100% | 998.82 | 803 / 803 | 0% | 0 | 0 / 0 |
brain | 20% | 44.57 | 534 / 2642 | 9% | 0.62 | 64 / 705 |
lung | 21% | 11.20 | 123 / 578 | 4% | 0.15 | 44 / 1155 |
skin | 1% | 2.02 | 24 / 1809 | 21% | 0.49 | 98 / 472 |
uterus | 0% | 0 | 0 / 170 | 17% | 1.91 | 76 / 459 |
adrenal gland | 0% | 0.16 | 1 / 258 | 10% | 0.90 | 24 / 230 |
bladder | 0% | 0 | 0 / 21 | 7% | 0.36 | 37 / 504 |
ovary | 0% | 0 | 0 / 180 | 5% | 0.49 | 21 / 430 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.09 | 2 / 45 |
breast | 0% | 0.20 | 1 / 459 | 3% | 0.38 | 36 / 1118 |
esophagus | 0% | 0.05 | 2 / 1445 | 3% | 0.08 | 5 / 183 |
stomach | 0% | 0 | 0 / 359 | 2% | 0.10 | 7 / 286 |
intestine | 0% | 0 | 0 / 966 | 2% | 0.04 | 8 / 527 |
thymus | 0% | 0.51 | 1 / 653 | 1% | 0.22 | 7 / 605 |
liver | 0% | 0 | 0 / 226 | 1% | 0.03 | 5 / 406 |
prostate | 0% | 0.14 | 1 / 245 | 1% | 0.01 | 3 / 502 |
peripheral blood | 1% | 0.58 | 6 / 929 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 1% | 0.01 | 1 / 178 |
kidney | 0% | 0 | 0 / 89 | 0% | 0.01 | 3 / 901 |
blood vessel | 0% | 0.41 | 3 / 1335 | 0% | 0 | 0 / 0 |
adipose | 0% | 0.07 | 2 / 1204 | 0% | 0 | 0 / 0 |
heart | 0% | 0.04 | 1 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0009653 | Biological process | anatomical structure morphogenesis |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_1905962 | Biological process | glutamatergic neuron differentiation |
GO_0048664 | Biological process | neuron fate determination |
GO_0008283 | Biological process | cell population proliferation |
GO_0120007 | Biological process | negative regulation of glutamatergic neuron differentiation |
GO_0021522 | Biological process | spinal cord motor neuron differentiation |
GO_0007517 | Biological process | muscle organ development |
GO_0001947 | Biological process | heart looping |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | LBX1 |
Protein name | Transcription factor LBX1 (Ladybird homeobox protein homolog 1) |
Synonyms | LBX1H |
Description | FUNCTION: Transcription factor required for the development of GABAergic interneurons in the dorsal horn of the spinal cord and migration and further development of hypaxial muscle precursor cells for limb muscles, diaphragm and hypoglossal cord. . |
Accessions | P52954 ENST00000370193.4 |