Name | Number of supported studies | Average coverage | |
---|---|---|---|
type II pneumocyte | 12 studies | 66% ± 17% | |
dendritic cell | 9 studies | 72% ± 20% | |
type I pneumocyte | 3 studies | 19% ± 1% | |
monocyte-derived dendritic cell | 3 studies | 81% ± 3% |
Insufficient scRNA-seq data for expression of LAMP3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 11531.70 | 576 / 578 | 95% | 81.50 | 1095 / 1155 |
pancreas | 100% | 382.74 | 327 / 328 | 66% | 10.86 | 118 / 178 |
thymus | 74% | 241.43 | 486 / 653 | 75% | 18.92 | 455 / 605 |
esophagus | 39% | 181.26 | 570 / 1445 | 93% | 40.24 | 171 / 183 |
prostate | 87% | 189.08 | 214 / 245 | 36% | 5.83 | 179 / 502 |
skin | 87% | 314.08 | 1571 / 1809 | 33% | 4.90 | 155 / 472 |
bladder | 48% | 60.00 | 10 / 21 | 67% | 20.29 | 339 / 504 |
tonsil | 0% | 0 | 0 / 0 | 98% | 75.29 | 44 / 45 |
intestine | 36% | 97.82 | 344 / 966 | 56% | 8.70 | 297 / 527 |
stomach | 23% | 29.58 | 81 / 359 | 65% | 12.37 | 185 / 286 |
uterus | 8% | 14.31 | 14 / 170 | 78% | 40.59 | 357 / 459 |
spleen | 83% | 182.32 | 200 / 241 | 0% | 0 | 0 / 0 |
ovary | 1% | 24.51 | 1 / 180 | 77% | 21.50 | 331 / 430 |
breast | 25% | 30.03 | 117 / 459 | 48% | 12.92 | 534 / 1118 |
kidney | 35% | 72.92 | 31 / 89 | 24% | 2.61 | 217 / 901 |
lymph node | 0% | 0 | 0 / 0 | 59% | 25.44 | 17 / 29 |
adrenal gland | 36% | 51.81 | 92 / 258 | 6% | 0.95 | 14 / 230 |
peripheral blood | 35% | 2456.05 | 322 / 929 | 0% | 0 | 0 / 0 |
liver | 10% | 16.95 | 22 / 226 | 14% | 1.96 | 56 / 406 |
adipose | 15% | 19.91 | 175 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 6% | 9.09 | 85 / 1335 | 0% | 0 | 0 / 0 |
brain | 2% | 3.26 | 58 / 2642 | 1% | 0.21 | 10 / 705 |
heart | 2% | 2.87 | 17 / 861 | 0% | 0 | 0 / 0 |
muscle | 1% | 1.30 | 9 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0043154 | Biological process | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0035455 | Biological process | response to interferon-alpha |
GO_1901799 | Biological process | negative regulation of proteasomal protein catabolic process |
GO_0002250 | Biological process | adaptive immune response |
GO_0046718 | Biological process | symbiont entry into host cell |
GO_0010506 | Biological process | regulation of autophagy |
GO_1903900 | Biological process | regulation of viral life cycle |
GO_0072594 | Biological process | establishment of protein localization to organelle |
GO_0031902 | Cellular component | late endosome membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005769 | Cellular component | early endosome |
GO_0031901 | Cellular component | early endosome membrane |
GO_0009986 | Cellular component | cell surface |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0097233 | Cellular component | alveolar lamellar body membrane |
GO_0031982 | Cellular component | vesicle |
GO_0005765 | Cellular component | lysosomal membrane |
Gene name | LAMP3 |
Protein name | Lysosomal associated membrane protein 3 Lysosome-associated membrane glycoprotein 3 (LAMP-3) (Lysosomal-associated membrane protein 3) (DC-lysosome-associated membrane glycoprotein) (DC LAMP) (Protein TSC403) (CD antigen CD208) |
Synonyms | TSC403 DCLAMP |
Description | FUNCTION: Lysosomal membrane glycoprotein which plays a role in the unfolded protein response (UPR) that contributes to protein degradation and cell survival during proteasomal dysfunction . Plays a role in the process of fusion of the lysosome with the autophagosome, thereby modulating the autophagic process . Promotes hepatocellular lipogenesis through activation of the PI3K/Akt pathway . May also play a role in dendritic cell function and in adaptive immunity . .; FUNCTION: (Microbial infection) Plays a positive role in post-entry steps of influenza A virus replication, either virus uncoating, cytosolic transport, or nuclear import of viral components, and promotes nuclear accumulation of influenza nucleoprotein/NP at early stages of viral infection. .; FUNCTION: (Microbial infection) Supports the FURIN-mediated cleavage of mumps virus fusion protein F by interacting with both FURIN and the unprocessed form but not the processed form of the viral protein F. .; FUNCTION: (Microbial infection) Promotes the intracellular proliferation of Salmonella typhimuium. . |
Accessions | Q9UQV4 ENST00000470251.1 ENST00000466939.1 ENST00000476015.1 C9JYP5 ENST00000265598.8 C9JDI8 E7ETP9 |