Name | Number of supported studies | Average coverage | |
---|---|---|---|
enterocyte | 8 studies | 51% ± 25% | |
goblet cell | 8 studies | 39% ± 17% | |
progenitor cell | 3 studies | 38% ± 15% | |
brush cell | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
intestine | 5 studies | 26% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 95% | 13352.12 | 915 / 966 | 76% | 397.83 | 401 / 527 |
stomach | 86% | 782.66 | 308 / 359 | 63% | 273.98 | 179 / 286 |
bladder | 86% | 318.95 | 18 / 21 | 57% | 324.04 | 289 / 504 |
skin | 71% | 10.96 | 1292 / 1809 | 0% | 0 | 0 / 472 |
esophagus | 48% | 15.20 | 697 / 1445 | 22% | 105.78 | 40 / 183 |
uterus | 54% | 9.90 | 91 / 170 | 7% | 25.69 | 30 / 459 |
pancreas | 32% | 2.71 | 106 / 328 | 23% | 84.41 | 41 / 178 |
prostate | 53% | 11.56 | 130 / 245 | 0% | 0.88 | 2 / 502 |
ovary | 47% | 5.21 | 84 / 180 | 0% | 0.35 | 1 / 430 |
breast | 35% | 109.34 | 159 / 459 | 1% | 4.28 | 7 / 1118 |
adrenal gland | 35% | 2.90 | 90 / 258 | 0% | 0 | 0 / 230 |
spleen | 35% | 3.65 | 84 / 241 | 0% | 0 | 0 / 0 |
lung | 26% | 3.38 | 153 / 578 | 7% | 37.75 | 84 / 1155 |
liver | 30% | 2.85 | 67 / 226 | 3% | 10.91 | 14 / 406 |
kidney | 30% | 2.29 | 27 / 89 | 1% | 10.11 | 12 / 901 |
thymus | 26% | 2.12 | 170 / 653 | 0% | 0 | 0 / 605 |
blood vessel | 24% | 2.66 | 326 / 1335 | 0% | 0 | 0 / 0 |
adipose | 24% | 4.36 | 285 / 1204 | 0% | 0 | 0 / 0 |
heart | 21% | 1.82 | 181 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 21% | 1.43 | 195 / 929 | 0% | 0 | 0 / 0 |
muscle | 21% | 1.80 | 168 / 803 | 0% | 0 | 0 / 0 |
brain | 16% | 1.19 | 432 / 2642 | 0% | 0 | 0 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006915 | Biological process | apoptotic process |
GO_0045109 | Biological process | intermediate filament organization |
GO_0050708 | Biological process | regulation of protein secretion |
GO_0009267 | Biological process | cellular response to starvation |
GO_0030855 | Biological process | epithelial cell differentiation |
GO_0045111 | Cellular component | intermediate filament cytoskeleton |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005882 | Cellular component | intermediate filament |
GO_0005200 | Molecular function | structural constituent of cytoskeleton |
GO_0005515 | Molecular function | protein binding |
Gene name | KRT20 |
Protein name | Keratin, type I cytoskeletal 20 (Cytokeratin-20) (CK-20) (Keratin-20) (K20) (Protein IT) |
Synonyms | |
Description | FUNCTION: Plays a significant role in maintaining keratin filament organization in intestinal epithelia. When phosphorylated, plays a role in the secretion of mucin in the small intestine (By similarity). . |
Accessions | ENST00000576098.2 ENST00000167588.4 P35900 |