Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 9 studies | 45% ± 25% | |
mast cell | 9 studies | 41% ± 15% | |
oligodendrocyte precursor cell | 8 studies | 31% ± 12% | |
endothelial cell | 7 studies | 32% ± 14% | |
GABAergic neuron | 7 studies | 41% ± 19% | |
interneuron | 6 studies | 36% ± 14% | |
neuron | 5 studies | 32% ± 13% | |
epithelial cell | 3 studies | 18% ± 2% | |
retinal rod cell | 3 studies | 18% ± 3% | |
astrocyte | 3 studies | 30% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 10 studies | 32% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 983.54 | 2593 / 2642 | 98% | 16.90 | 694 / 705 |
prostate | 100% | 899.70 | 245 / 245 | 95% | 8.31 | 479 / 502 |
intestine | 99% | 434.20 | 960 / 966 | 92% | 7.14 | 487 / 527 |
breast | 97% | 529.50 | 446 / 459 | 92% | 7.02 | 1028 / 1118 |
stomach | 100% | 570.14 | 359 / 359 | 88% | 7.13 | 253 / 286 |
kidney | 100% | 1393.91 | 89 / 89 | 88% | 6.62 | 793 / 901 |
adrenal gland | 100% | 893.31 | 258 / 258 | 86% | 5.83 | 197 / 230 |
pancreas | 100% | 1581.57 | 328 / 328 | 83% | 3.87 | 147 / 178 |
lung | 99% | 1026.27 | 571 / 578 | 80% | 6.40 | 921 / 1155 |
ovary | 99% | 586.21 | 179 / 180 | 75% | 5.25 | 321 / 430 |
bladder | 100% | 582.62 | 21 / 21 | 71% | 4.25 | 358 / 504 |
thymus | 99% | 452.67 | 647 / 653 | 69% | 3.39 | 417 / 605 |
esophagus | 88% | 336.51 | 1271 / 1445 | 77% | 7.43 | 141 / 183 |
skin | 95% | 452.63 | 1720 / 1809 | 53% | 3.80 | 250 / 472 |
uterus | 100% | 929.86 | 170 / 170 | 48% | 3.50 | 220 / 459 |
adipose | 96% | 306.93 | 1151 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 4.49 | 76 / 80 |
heart | 88% | 280.91 | 755 / 861 | 0% | 0 | 0 / 0 |
spleen | 77% | 164.61 | 186 / 241 | 0% | 0 | 0 / 0 |
liver | 47% | 100.70 | 106 / 226 | 23% | 0.96 | 93 / 406 |
muscle | 55% | 127.91 | 445 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 43% | 89.91 | 576 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 27% | 1.24 | 12 / 45 |
peripheral blood | 9% | 21.90 | 82 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032391 | Cellular component | photoreceptor connecting cilium |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | KIAA1549 |
Protein name | KIAA1549 protein UPF0606 protein KIAA1549 |
Synonyms | |
Description | FUNCTION: May play a role in photoreceptor function. . |
Accessions | Q9HCM3 ENST00000440172.5 [Q9HCM3-2] ENST00000422774.2 [Q9HCM3-1] Q6FII2 |