Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 27 studies | 45% ± 19% | |
basal cell | 14 studies | 47% ± 25% | |
oligodendrocyte precursor cell | 13 studies | 50% ± 19% | |
ciliated cell | 12 studies | 38% ± 18% | |
glutamatergic neuron | 12 studies | 47% ± 21% | |
fibroblast | 12 studies | 33% ± 21% | |
GABAergic neuron | 10 studies | 53% ± 24% | |
capillary endothelial cell | 10 studies | 33% ± 21% | |
astrocyte | 9 studies | 51% ± 25% | |
epithelial cell | 7 studies | 58% ± 23% | |
club cell | 7 studies | 54% ± 25% | |
mesothelial cell | 7 studies | 38% ± 20% | |
endothelial cell of lymphatic vessel | 7 studies | 33% ± 12% | |
respiratory goblet cell | 6 studies | 49% ± 27% | |
Mueller cell | 6 studies | 67% ± 27% | |
type I pneumocyte | 6 studies | 29% ± 11% | |
secretory cell | 5 studies | 29% ± 7% | |
neuron | 5 studies | 24% ± 9% | |
adipocyte | 5 studies | 26% ± 8% | |
cardiac muscle cell | 5 studies | 57% ± 14% | |
smooth muscle cell | 5 studies | 33% ± 8% | |
type II pneumocyte | 5 studies | 45% ± 12% | |
interneuron | 5 studies | 50% ± 26% | |
microglial cell | 4 studies | 31% ± 24% | |
retinal pigment epithelial cell | 4 studies | 62% ± 28% | |
endothelial cell of artery | 4 studies | 36% ± 17% | |
vein endothelial cell | 4 studies | 31% ± 10% | |
amacrine cell | 4 studies | 54% ± 33% | |
endothelial cell of vascular tree | 4 studies | 47% ± 19% | |
Schwann cell | 4 studies | 58% ± 20% | |
ionocyte | 3 studies | 23% ± 5% | |
cholangiocyte | 3 studies | 50% ± 19% | |
endothelial cell of sinusoid | 3 studies | 34% ± 12% | |
glomerular endothelial cell | 3 studies | 18% ± 1% | |
squamous epithelial cell | 3 studies | 43% ± 18% | |
hepatocyte | 3 studies | 40% ± 18% | |
retinal cone cell | 3 studies | 36% ± 10% | |
connective tissue cell | 3 studies | 25% ± 7% | |
ependymal cell | 3 studies | 48% ± 21% | |
goblet cell | 3 studies | 46% ± 36% | |
brush cell | 3 studies | 42% ± 13% | |
pericyte | 3 studies | 32% ± 4% | |
kidney loop of Henle epithelial cell | 3 studies | 43% ± 20% | |
renal principal cell | 3 studies | 50% ± 25% | |
mucus secreting cell | 3 studies | 60% ± 18% | |
myoepithelial cell | 3 studies | 65% ± 29% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 10829.03 | 459 / 459 | 99% | 55.08 | 1110 / 1118 |
thymus | 100% | 10312.51 | 652 / 653 | 98% | 99.73 | 595 / 605 |
prostate | 99% | 7596.70 | 242 / 245 | 99% | 36.57 | 497 / 502 |
ovary | 97% | 3144.31 | 175 / 180 | 100% | 48.77 | 428 / 430 |
stomach | 98% | 2996.85 | 351 / 359 | 98% | 33.96 | 281 / 286 |
intestine | 98% | 3358.55 | 945 / 966 | 98% | 29.17 | 517 / 527 |
esophagus | 97% | 4949.73 | 1404 / 1445 | 98% | 56.40 | 180 / 183 |
lung | 97% | 4002.55 | 561 / 578 | 98% | 35.05 | 1135 / 1155 |
kidney | 100% | 4481.34 | 89 / 89 | 95% | 23.33 | 854 / 901 |
pancreas | 98% | 2715.22 | 322 / 328 | 96% | 36.48 | 170 / 178 |
bladder | 90% | 3081.76 | 19 / 21 | 97% | 28.86 | 488 / 504 |
uterus | 71% | 1435.16 | 120 / 170 | 94% | 32.04 | 430 / 459 |
liver | 99% | 2539.90 | 223 / 226 | 49% | 7.37 | 200 / 406 |
adrenal gland | 100% | 5555.27 | 258 / 258 | 19% | 2.61 | 44 / 230 |
skin | 81% | 4161.89 | 1473 / 1809 | 27% | 4.86 | 127 / 472 |
muscle | 100% | 16366.52 | 803 / 803 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.48 | 1 / 1 |
adipose | 100% | 6105.26 | 1203 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 43.86 | 44 / 45 |
heart | 95% | 2573.95 | 815 / 861 | 0% | 0 | 0 / 0 |
spleen | 89% | 1690.22 | 214 / 241 | 0% | 0 | 0 / 0 |
brain | 41% | 779.55 | 1092 / 2642 | 15% | 2.11 | 106 / 705 |
blood vessel | 49% | 1019.62 | 648 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 33% | 4.97 | 26 / 80 |
lymph node | 0% | 0 | 0 / 0 | 31% | 5.16 | 9 / 29 |
peripheral blood | 10% | 248.06 | 95 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048706 | Biological process | embryonic skeletal system development |
GO_0005737 | Cellular component | cytoplasm |
GO_0005813 | Cellular component | centrosome |
GO_0003674 | Molecular function | molecular_function |
Gene name | KIAA1217 |
Protein name | Sickle tail protein homolog KIAA1217 protein KIAA1217 |
Synonyms | SKT |
Description | FUNCTION: Required for normal development of intervertebral disks. . |
Accessions | ENST00000635163.1 ENST00000396445.5 [Q5T5P2-8] Q5T5P1 ENST00000376452.7 [Q5T5P2-10] ENST00000376454.8 [Q5T5P2-1] ENST00000430453.6 [Q5T5P2-9] ENST00000307544.10 [Q5T5P2-6] A0A8Q3WMI8 ENST00000376456.8 ENST00000376462.5 [Q5T5P2-9] ENST00000696626.1 ENST00000636305.1 Q5T5P0 A0A0U1RQK8 ENST00000376451.4 [Q5T5P2-3] ENST00000635504.1 ENST00000458595.5 [Q5T5P2-7] ENST00000438429.5 A0A1B0GU17 B7ZM29 A0A0U1RRK8 ENST00000396446.5 [Q5T5P2-4] Q5T5P2 |