Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 12 studies | 26% ± 11% | |
astrocyte | 12 studies | 29% ± 14% | |
glutamatergic neuron | 11 studies | 53% ± 25% | |
oligodendrocyte precursor cell | 10 studies | 22% ± 9% | |
basal cell | 8 studies | 25% ± 10% | |
GABAergic neuron | 7 studies | 42% ± 17% | |
interneuron | 6 studies | 34% ± 10% | |
kidney loop of Henle epithelial cell | 5 studies | 32% ± 12% | |
neuron | 5 studies | 32% ± 11% | |
epithelial cell | 4 studies | 34% ± 6% | |
amacrine cell | 4 studies | 24% ± 5% | |
retina horizontal cell | 4 studies | 21% ± 5% | |
oligodendrocyte | 4 studies | 25% ± 13% | |
endothelial cell | 3 studies | 52% ± 7% | |
GABAergic interneuron | 3 studies | 26% ± 12% | |
glial cell | 3 studies | 24% ± 2% | |
granule cell | 3 studies | 28% ± 8% | |
glycinergic amacrine cell | 3 studies | 28% ± 5% | |
ependymal cell | 3 studies | 39% ± 13% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 32% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1359.62 | 244 / 245 | 99% | 11.71 | 495 / 502 |
brain | 98% | 2291.67 | 2577 / 2642 | 99% | 10.83 | 700 / 705 |
ovary | 97% | 630.67 | 174 / 180 | 100% | 33.56 | 430 / 430 |
thymus | 97% | 694.84 | 635 / 653 | 98% | 12.54 | 590 / 605 |
skin | 99% | 2259.15 | 1794 / 1809 | 94% | 9.24 | 445 / 472 |
esophagus | 98% | 1610.85 | 1422 / 1445 | 93% | 18.60 | 170 / 183 |
adrenal gland | 98% | 1039.31 | 252 / 258 | 86% | 8.53 | 198 / 230 |
uterus | 88% | 577.25 | 150 / 170 | 94% | 20.76 | 433 / 459 |
breast | 81% | 838.17 | 372 / 459 | 99% | 15.59 | 1103 / 1118 |
kidney | 99% | 1670.66 | 88 / 89 | 76% | 7.24 | 689 / 901 |
bladder | 90% | 624.62 | 19 / 21 | 66% | 8.29 | 332 / 504 |
lung | 45% | 217.88 | 262 / 578 | 86% | 13.84 | 993 / 1155 |
pancreas | 35% | 142.68 | 116 / 328 | 94% | 7.58 | 168 / 178 |
stomach | 76% | 382.36 | 272 / 359 | 51% | 4.31 | 146 / 286 |
intestine | 76% | 474.57 | 735 / 966 | 44% | 3.11 | 230 / 527 |
tonsil | 0% | 0 | 0 / 0 | 100% | 23.83 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.02 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 98% | 8.22 | 78 / 80 |
blood vessel | 97% | 676.33 | 1292 / 1335 | 0% | 0 | 0 / 0 |
heart | 72% | 720.36 | 623 / 861 | 0% | 0 | 0 / 0 |
adipose | 70% | 387.53 | 844 / 1204 | 0% | 0 | 0 / 0 |
spleen | 27% | 102.93 | 65 / 241 | 0% | 0 | 0 / 0 |
liver | 2% | 7.71 | 5 / 226 | 23% | 1.40 | 93 / 406 |
muscle | 15% | 64.59 | 124 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 12% | 53.73 | 113 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.53 | 2 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051260 | Biological process | protein homooligomerization |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0008134 | Molecular function | transcription factor binding |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | KCTD1 |
Protein name | Potassium channel tetramerization domain containing 1 BTB/POZ domain-containing protein KCTD1 (Potassium channel tetramerization domain-containing protein 1) |
Synonyms | C18orf5 |
Description | FUNCTION: May repress the transcriptional activity of AP-2 family members, including TFAP2A, TFAP2B and TFAP2C to various extent. . |
Accessions | J3QLL6 ENST00000580638.5 J3KSG1 ENST00000579973.5 ENST00000317932.11 ENST00000417602.5 ENST00000578973.1 ENST00000408011.7 ENST00000580059.7 J3QRK1 ENST00000580191.5 A0A2U3U043 Q719H9 |