Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 11 studies | 78% ± 21% | |
glutamatergic neuron | 10 studies | 78% ± 21% | |
GABAergic neuron | 8 studies | 60% ± 23% | |
endothelial cell | 8 studies | 55% ± 19% | |
microglial cell | 8 studies | 51% ± 23% | |
neuron | 7 studies | 40% ± 20% | |
astrocyte | 7 studies | 51% ± 25% | |
retinal ganglion cell | 6 studies | 81% ± 21% | |
oligodendrocyte | 6 studies | 51% ± 29% | |
amacrine cell | 5 studies | 74% ± 28% | |
granule cell | 4 studies | 74% ± 26% | |
retinal bipolar neuron | 4 studies | 47% ± 28% | |
Mueller cell | 4 studies | 49% ± 23% | |
retinal rod cell | 4 studies | 86% ± 6% | |
interneuron | 4 studies | 54% ± 29% | |
GABAergic amacrine cell | 3 studies | 88% ± 6% | |
OFF-bipolar cell | 3 studies | 82% ± 17% | |
ON-bipolar cell | 3 studies | 86% ± 14% | |
glycinergic amacrine cell | 3 studies | 82% ± 24% | |
retinal cone cell | 3 studies | 40% ± 19% | |
retinal pigment epithelial cell | 3 studies | 31% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 561.91 | 89 / 89 | 67% | 2.16 | 603 / 901 |
brain | 99% | 2286.27 | 2608 / 2642 | 54% | 2.09 | 379 / 705 |
thymus | 87% | 264.23 | 565 / 653 | 4% | 0.08 | 27 / 605 |
uterus | 72% | 261.86 | 122 / 170 | 4% | 0.10 | 20 / 459 |
intestine | 74% | 477.04 | 715 / 966 | 1% | 0.02 | 6 / 527 |
adrenal gland | 44% | 103.12 | 114 / 258 | 24% | 0.74 | 55 / 230 |
ovary | 39% | 88.72 | 70 / 180 | 9% | 0.22 | 40 / 430 |
bladder | 24% | 39.33 | 5 / 21 | 1% | 0.04 | 5 / 504 |
stomach | 15% | 28.92 | 53 / 359 | 1% | 0.04 | 3 / 286 |
esophagus | 11% | 19.91 | 166 / 1445 | 2% | 0.02 | 3 / 183 |
breast | 12% | 20.63 | 53 / 459 | 1% | 0.03 | 12 / 1118 |
lung | 3% | 6.01 | 20 / 578 | 4% | 0.11 | 49 / 1155 |
skin | 5% | 8.58 | 88 / 1809 | 3% | 0.09 | 13 / 472 |
adipose | 6% | 10.46 | 73 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 6% | 10.24 | 76 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 1% | 0.93 | 2 / 328 | 4% | 0.10 | 7 / 178 |
prostate | 4% | 6.72 | 11 / 245 | 0% | 0 | 0 / 502 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.05 | 1 / 45 |
eye | 0% | 0 | 0 / 0 | 1% | 0.03 | 1 / 80 |
heart | 0% | 0.66 | 4 / 861 | 0% | 0 | 0 / 0 |
spleen | 0% | 0.58 | 1 / 241 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.00 | 1 / 406 |
muscle | 0% | 0.17 | 1 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.17 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_1901379 | Biological process | regulation of potassium ion transmembrane transport |
GO_0071805 | Biological process | potassium ion transmembrane transport |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005777 | Cellular component | peroxisome |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005886 | Cellular component | plasma membrane |
GO_0008076 | Cellular component | voltage-gated potassium channel complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0030425 | Cellular component | dendrite |
GO_0005267 | Molecular function | potassium channel activity |
GO_0015459 | Molecular function | potassium channel regulator activity |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | KCNIP4 |
Protein name | Potassium voltage-gated channel interacting protein 4 Kv channel-interacting protein 4 (KChIP4) (A-type potassium channel modulatory protein 4) (Calsenilin-like protein) (Potassium channel-interacting protein 4) Kv channel-interacting protein 4 Uncharacterized protein KCNIP4 |
Synonyms | CALP KCHIP4 |
Description | FUNCTION: Regulatory subunit of Kv4/D (Shal)-type voltage-gated rapidly inactivating A-type potassium channels. Modulates KCND2 channel density, inactivation kinetics and rate of recovery from inactivation in a calcium-dependent and isoform-specific manner . Modulates KCND3/Kv4.3 currents . Isoform 4 does not increase KCND2 expression at the cell membrane . Isoform 4 retains KCND3 in the endoplasmic reticulum and negatively regulates its expression at the cell membrane. . |
Accessions | ENST00000382152.7 [Q6PIL6-1] ENST00000447367.6 [Q6PIL6-2] ENST00000382149.9 ENST00000382150.8 [Q6PIL6-4] ENST00000515786.2 F5H395 Q6PIL6 Q4W5B5 Q3YAB7 ENST00000629040.1 A0A0G2JRL8 ENST00000509207.1 [Q6PIL6-3] ENST00000382148.7 [Q6PIL6-5] |