Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| classical monocyte | 14 studies | 25% ± 8% | |
| ciliated cell | 13 studies | 34% ± 14% | |
| macrophage | 9 studies | 22% ± 7% | |
| non-classical monocyte | 9 studies | 25% ± 8% | |
| CD8-positive, alpha-beta T cell | 7 studies | 17% ± 2% | |
| monocyte | 6 studies | 18% ± 3% | |
| epithelial cell | 6 studies | 31% ± 11% | |
| conventional dendritic cell | 5 studies | 27% ± 9% | |
| natural killer cell | 5 studies | 18% ± 3% | |
| regulatory T cell | 5 studies | 18% ± 3% | |
| smooth muscle cell | 4 studies | 18% ± 3% | |
| enterocyte | 4 studies | 19% ± 1% | |
| fibroblast | 4 studies | 27% ± 13% | |
| endothelial cell | 4 studies | 21% ± 5% | |
| oligodendrocyte | 3 studies | 23% ± 6% | |
| pericyte | 3 studies | 22% ± 2% | |
| myeloid cell | 3 studies | 27% ± 7% | |
| exhausted T cell | 3 studies | 19% ± 2% | |
| intermediate monocyte | 3 studies | 30% ± 9% | |
| dendritic cell | 3 studies | 30% ± 9% | |
| basal cell | 3 studies | 32% ± 13% | |
| connective tissue cell | 3 studies | 27% ± 9% | |
| plasmacytoid dendritic cell | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 1268.77 | 2639 / 2642 | 100% | 49.60 | 705 / 705 |
| thymus | 100% | 1589.84 | 653 / 653 | 100% | 54.29 | 604 / 605 |
| uterus | 100% | 1257.79 | 170 / 170 | 100% | 63.57 | 457 / 459 |
| liver | 100% | 891.39 | 226 / 226 | 100% | 46.91 | 404 / 406 |
| esophagus | 100% | 1440.24 | 1445 / 1445 | 99% | 35.32 | 182 / 183 |
| adrenal gland | 100% | 1128.61 | 258 / 258 | 99% | 59.81 | 228 / 230 |
| prostate | 100% | 1208.65 | 245 / 245 | 99% | 40.55 | 497 / 502 |
| intestine | 100% | 1225.97 | 965 / 966 | 99% | 51.14 | 520 / 527 |
| kidney | 100% | 1176.85 | 89 / 89 | 99% | 38.21 | 888 / 901 |
| skin | 100% | 1396.74 | 1809 / 1809 | 99% | 73.90 | 465 / 472 |
| bladder | 100% | 1326.52 | 21 / 21 | 98% | 72.03 | 495 / 504 |
| ovary | 100% | 1009.26 | 180 / 180 | 98% | 34.02 | 422 / 430 |
| stomach | 100% | 1036.04 | 359 / 359 | 98% | 45.21 | 280 / 286 |
| lung | 99% | 1055.11 | 575 / 578 | 98% | 43.53 | 1130 / 1155 |
| breast | 100% | 1201.22 | 459 / 459 | 96% | 43.58 | 1078 / 1118 |
| pancreas | 97% | 536.53 | 319 / 328 | 99% | 60.77 | 176 / 178 |
| adipose | 100% | 1273.64 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 75.32 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 73.59 | 29 / 29 |
| spleen | 100% | 1136.63 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 58.50 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 25.99 | 1 / 1 |
| heart | 100% | 978.40 | 857 / 861 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 1195.76 | 1328 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 99% | 1019.90 | 796 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 97% | 791.15 | 904 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006508 | Biological process | proteolysis |
| GO_0016579 | Biological process | protein deubiquitination |
| GO_0005829 | Cellular component | cytosol |
| GO_0005515 | Molecular function | protein binding |
| GO_0004843 | Molecular function | cysteine-type deubiquitinase activity |
| Gene name | JOSD2 |
| Protein name | ubiquitinyl hydrolase 1 (EC 3.4.19.12) Josephin-2 (EC 3.4.19.12) (Josephin domain-containing protein 2) |
| Synonyms | SBBI54 |
| Description | FUNCTION: Cleaves 'Lys-63'-linked poly-ubiquitin chains, and with lesser efficiency 'Lys-48'-linked poly-ubiquitin chains (in vitro). May act as a deubiquitinating enzyme. . |
| Accessions | M0QZL8 ENST00000598418.6 [Q8TAC2-1] ENST00000595669.5 [Q8TAC2-2] ENST00000594350.1 Q7Z7N5 ENST00000601423.5 [Q8TAC2-1] Q8TAC2 |