Insufficient scRNA-seq data for expression of IRX1 at single-cell level.
Insufficient scRNA-seq data for expression of IRX1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1184.41 | 458 / 459 | 58% | 13.53 | 653 / 1118 |
skin | 100% | 464.84 | 1805 / 1809 | 28% | 2.43 | 130 / 472 |
brain | 56% | 99.34 | 1484 / 2642 | 67% | 14.15 | 475 / 705 |
lung | 84% | 220.25 | 483 / 578 | 22% | 3.04 | 255 / 1155 |
kidney | 99% | 778.37 | 88 / 89 | 4% | 0.57 | 40 / 901 |
adipose | 60% | 275.89 | 718 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 36% | 3.48 | 29 / 80 |
esophagus | 12% | 13.81 | 180 / 1445 | 19% | 3.51 | 34 / 183 |
blood vessel | 26% | 43.41 | 342 / 1335 | 0% | 0 | 0 / 0 |
thymus | 6% | 3.86 | 36 / 653 | 7% | 1.21 | 43 / 605 |
tonsil | 0% | 0 | 0 / 0 | 7% | 1.82 | 3 / 45 |
pancreas | 1% | 1.06 | 3 / 328 | 6% | 1.04 | 10 / 178 |
heart | 6% | 5.58 | 52 / 861 | 0% | 0 | 0 / 0 |
prostate | 4% | 4.16 | 11 / 245 | 1% | 0.07 | 6 / 502 |
ovary | 1% | 0.33 | 1 / 180 | 4% | 0.49 | 18 / 430 |
uterus | 1% | 0.46 | 1 / 170 | 4% | 0.44 | 17 / 459 |
bladder | 0% | 0 | 0 / 21 | 3% | 0.19 | 14 / 504 |
intestine | 0% | 0 | 0 / 966 | 1% | 0.26 | 5 / 527 |
stomach | 0% | 0.27 | 1 / 359 | 0% | 0.01 | 1 / 286 |
adrenal gland | 0% | 0.29 | 1 / 258 | 0% | 0 | 0 / 230 |
muscle | 0% | 0.25 | 3 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0 | 0 / 406 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0030182 | Biological process | neuron differentiation |
GO_0014070 | Biological process | response to organic cyclic compound |
GO_0072086 | Biological process | specification of loop of Henle identity |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0048468 | Biological process | cell development |
GO_0072272 | Biological process | proximal/distal pattern formation involved in metanephric nephron development |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
Gene name | IRX1 |
Protein name | Iroquois-class homeodomain protein IRX-1 (Homeodomain protein IRXA1) (Iroquois homeobox protein 1) |
Synonyms | IRXA1 |
Description | |
Accessions | ENST00000302006.4 P78414 |