Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 23% ± 5% | |
epithelial cell | 5 studies | 25% ± 7% | |
astrocyte | 4 studies | 28% ± 9% | |
oligodendrocyte precursor cell | 4 studies | 29% ± 9% | |
macrophage | 4 studies | 21% ± 2% | |
GABAergic neuron | 3 studies | 42% ± 1% | |
glutamatergic neuron | 3 studies | 54% ± 4% | |
endothelial cell of lymphatic vessel | 3 studies | 17% ± 2% | |
oligodendrocyte | 3 studies | 27% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 41% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3801.90 | 1445 / 1445 | 100% | 36.38 | 183 / 183 |
lung | 100% | 3121.83 | 578 / 578 | 100% | 31.40 | 1155 / 1155 |
ovary | 100% | 3795.76 | 180 / 180 | 100% | 26.03 | 430 / 430 |
prostate | 100% | 3436.82 | 245 / 245 | 100% | 30.22 | 502 / 502 |
breast | 100% | 3233.31 | 459 / 459 | 100% | 36.02 | 1117 / 1118 |
brain | 100% | 2444.27 | 2639 / 2642 | 100% | 37.16 | 705 / 705 |
intestine | 100% | 4104.57 | 966 / 966 | 100% | 31.20 | 526 / 527 |
kidney | 100% | 2640.03 | 89 / 89 | 100% | 31.43 | 898 / 901 |
bladder | 100% | 4237.67 | 21 / 21 | 100% | 27.23 | 502 / 504 |
uterus | 100% | 4354.44 | 170 / 170 | 100% | 28.86 | 457 / 459 |
thymus | 100% | 3611.37 | 653 / 653 | 100% | 28.91 | 602 / 605 |
pancreas | 100% | 2617.17 | 328 / 328 | 99% | 26.19 | 177 / 178 |
stomach | 100% | 2934.55 | 359 / 359 | 99% | 29.14 | 283 / 286 |
liver | 100% | 2055.69 | 226 / 226 | 98% | 16.63 | 398 / 406 |
adrenal gland | 100% | 3677.02 | 258 / 258 | 98% | 25.13 | 225 / 230 |
skin | 100% | 3478.82 | 1809 / 1809 | 97% | 34.57 | 460 / 472 |
adipose | 100% | 3285.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4484.49 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.33 | 29 / 29 |
muscle | 100% | 2558.15 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3491.10 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 28.14 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.07 | 1 / 1 |
heart | 98% | 1775.14 | 847 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 15.59 | 71 / 80 |
peripheral blood | 79% | 1793.95 | 731 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0006606 | Biological process | protein import into nucleus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005515 | Molecular function | protein binding |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | IPO8 |
Protein name | Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8) Importin 8 |
Synonyms | RANBP8 |
Description | FUNCTION: Involved in nuclear protein import, either by acting as autonomous nuclear transport receptor or as an adapter-like protein in association with the importin-beta subunit KPNB1. Acting autonomously, may serve as receptor for nuclear localization signals (NLS) and promote translocation of import substrates through the nuclear pore complex (NPC) by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus . In vitro mediates the nuclear import of the signal recognition particle protein SRP19 . May also be involved in cytoplasm-to-nucleus shuttling of a broad spectrum of other cargos, including Argonaute-microRNAs complexes, the JUN protein, RELA/NF-kappa-B p65 subunit, the translation initiation factor EIF4E and a set of receptor-activated mothers against decapentaplegic homolog (SMAD) transcription factors that play a critical role downstream of the large family of transforming growth factor beta and bone morphogenetic protein (BMP) cytokines (Probable). . |
Accessions | F5H009 H0YH64 F5H815 ENST00000542464.1 ENST00000544829.5 [O15397-2] ENST00000535598.1 F5H292 O15397 ENST00000545077.1 ENST00000256079.9 [O15397-1] ENST00000543446.1 F5H2I3 ENST00000358724.4 A0A087WXH2 F5GXT5 ENST00000535989.1 ENST00000611458.4 ENST00000540979.1 F5H244 |