Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| neuron | 8 studies | 46% ± 23% | |
| glutamatergic neuron | 8 studies | 35% ± 17% | |
| GABAergic neuron | 7 studies | 37% ± 12% | |
| retinal ganglion cell | 6 studies | 78% ± 23% | |
| interneuron | 5 studies | 32% ± 16% | |
| amacrine cell | 4 studies | 38% ± 11% | |
| retina horizontal cell | 4 studies | 29% ± 14% | |
| retinal cone cell | 3 studies | 36% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 93% | 9683.89 | 2456 / 2642 | 84% | 78.17 | 594 / 705 |
| ureter | 0% | 0 | 0 / 0 | 100% | 23.16 | 1 / 1 |
| adrenal gland | 10% | 174.81 | 26 / 258 | 77% | 162.35 | 176 / 230 |
| bladder | 5% | 53.71 | 1 / 21 | 46% | 31.29 | 234 / 504 |
| uterus | 0% | 0 | 0 / 170 | 38% | 8.82 | 175 / 459 |
| pancreas | 0% | 3.52 | 1 / 328 | 37% | 9.12 | 66 / 178 |
| ovary | 0% | 0 | 0 / 180 | 36% | 7.23 | 155 / 430 |
| tonsil | 0% | 0 | 0 / 0 | 31% | 4.72 | 14 / 45 |
| lung | 0% | 0 | 0 / 578 | 21% | 4.24 | 244 / 1155 |
| lymph node | 0% | 0 | 0 / 0 | 17% | 1.53 | 5 / 29 |
| intestine | 14% | 151.54 | 134 / 966 | 3% | 0.46 | 15 / 527 |
| esophagus | 0% | 4.07 | 7 / 1445 | 16% | 3.05 | 29 / 183 |
| skin | 0% | 3.03 | 5 / 1809 | 6% | 0.88 | 30 / 472 |
| stomach | 2% | 21.91 | 8 / 359 | 3% | 0.65 | 10 / 286 |
| breast | 0% | 0 | 0 / 459 | 5% | 1.47 | 61 / 1118 |
| eye | 0% | 0 | 0 / 0 | 5% | 2.62 | 4 / 80 |
| prostate | 0% | 3.18 | 1 / 245 | 4% | 0.56 | 19 / 502 |
| thymus | 0% | 0 | 0 / 653 | 2% | 0.27 | 14 / 605 |
| kidney | 0% | 0 | 0 / 89 | 2% | 0.76 | 16 / 901 |
| liver | 0% | 0 | 0 / 226 | 1% | 0.06 | 4 / 406 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 0% | 0 | 0 / 1335 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
| muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| GO_0045109 | Biological process | intermediate filament organization |
| GO_1990830 | Biological process | cellular response to leukemia inhibitory factor |
| GO_0099170 | Biological process | postsynaptic modulation of chemical synaptic transmission |
| GO_0021762 | Biological process | substantia nigra development |
| GO_0030154 | Biological process | cell differentiation |
| GO_0060052 | Biological process | neurofilament cytoskeleton organization |
| GO_0099185 | Biological process | postsynaptic intermediate filament cytoskeleton organization |
| GO_0005883 | Cellular component | neurofilament |
| GO_0005615 | Cellular component | extracellular space |
| GO_0098685 | Cellular component | Schaffer collateral - CA1 synapse |
| GO_0099160 | Cellular component | postsynaptic intermediate filament cytoskeleton |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0036464 | Cellular component | cytoplasmic ribonucleoprotein granule |
| GO_0005882 | Cellular component | intermediate filament |
| GO_0005200 | Molecular function | structural constituent of cytoskeleton |
| GO_0005515 | Molecular function | protein binding |
| GO_0099184 | Molecular function | structural constituent of postsynaptic intermediate filament cytoskeleton |
| Gene name | INA |
| Protein name | Alpha-internexin (Alpha-Inx) (66 kDa neurofilament protein) (NF-66) (Neurofilament-66) (Neurofilament 5) |
| Synonyms | NEF5 |
| Description | FUNCTION: Class-IV neuronal intermediate filament that is able to self-assemble. It is involved in the morphogenesis of neurons. It may form an independent structural network without the involvement of other neurofilaments or it may cooperate with NEFL to form the filamentous backbone to which NEFM and NEFH attach to form the cross-bridges. May also cooperate with the neuronal intermediate filament protein PRPH to form filamentous networks (By similarity). . |
| Accessions | Q16352 ENST00000369849.9 |
