Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 13 studies | 46% ± 21% | |
microglial cell | 12 studies | 42% ± 15% | |
glutamatergic neuron | 10 studies | 40% ± 20% | |
macrophage | 8 studies | 30% ± 17% | |
GABAergic neuron | 6 studies | 30% ± 13% | |
retinal bipolar neuron | 5 studies | 45% ± 9% | |
OFF-bipolar cell | 4 studies | 43% ± 11% | |
ON-bipolar cell | 4 studies | 37% ± 10% | |
neuron | 3 studies | 27% ± 1% | |
granule cell | 3 studies | 38% ± 9% | |
rod bipolar cell | 3 studies | 44% ± 8% | |
myeloid cell | 3 studies | 25% ± 9% | |
interneuron | 3 studies | 35% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3506.89 | 2637 / 2642 | 99% | 56.03 | 699 / 705 |
adrenal gland | 75% | 291.05 | 194 / 258 | 70% | 31.78 | 161 / 230 |
prostate | 75% | 383.91 | 184 / 245 | 62% | 11.96 | 313 / 502 |
breast | 60% | 321.75 | 275 / 459 | 64% | 14.44 | 719 / 1118 |
spleen | 95% | 1282.94 | 229 / 241 | 0% | 0 | 0 / 0 |
bladder | 62% | 397.05 | 13 / 21 | 15% | 1.43 | 75 / 504 |
blood vessel | 70% | 290.15 | 930 / 1335 | 0% | 0 | 0 / 0 |
lung | 49% | 117.63 | 283 / 578 | 17% | 1.05 | 199 / 1155 |
kidney | 22% | 62.69 | 20 / 89 | 29% | 1.78 | 264 / 901 |
ovary | 9% | 22.79 | 17 / 180 | 36% | 2.11 | 153 / 430 |
adipose | 45% | 151.67 | 542 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 3% | 5.77 | 10 / 328 | 42% | 2.46 | 74 / 178 |
thymus | 10% | 21.49 | 64 / 653 | 29% | 1.86 | 175 / 605 |
uterus | 24% | 58.54 | 41 / 170 | 14% | 2.70 | 66 / 459 |
skin | 9% | 19.27 | 155 / 1809 | 13% | 0.92 | 62 / 472 |
intestine | 11% | 24.28 | 110 / 966 | 7% | 0.40 | 38 / 527 |
stomach | 7% | 15.07 | 26 / 359 | 10% | 0.82 | 30 / 286 |
esophagus | 7% | 16.91 | 106 / 1445 | 8% | 0.45 | 15 / 183 |
liver | 1% | 2.74 | 3 / 226 | 12% | 0.67 | 48 / 406 |
tonsil | 0% | 0 | 0 / 0 | 11% | 0.45 | 5 / 45 |
heart | 8% | 19.45 | 73 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 8% | 1.02 | 6 / 80 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.15 | 1 / 29 |
peripheral blood | 0% | 1.03 | 4 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.19 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007157 | Biological process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0060074 | Biological process | synapse maturation |
GO_0060077 | Cellular component | inhibitory synapse |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0005912 | Cellular component | adherens junction |
GO_0042734 | Cellular component | presynaptic membrane |
GO_0045211 | Cellular component | postsynaptic membrane |
Gene name | IGSF21 |
Protein name | Immunoglobulin superfamily member 21 (IgSF21) |
Synonyms | |
Description | FUNCTION: Involved in synaptic inhibition in the brain. Selectively regulates inhibitory presynaptic differentiation through interacting with presynaptic NRXN2. . |
Accessions | Q96ID5 ENST00000251296.4 |