Insufficient scRNA-seq data for expression of HTR6 at single-cell level.
Insufficient scRNA-seq data for expression of HTR6 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 77% | 101.91 | 2028 / 2642 | 33% | 0.79 | 230 / 705 |
uterus | 52% | 3.98 | 89 / 170 | 14% | 0.66 | 63 / 459 |
prostate | 62% | 4.91 | 151 / 245 | 3% | 0.05 | 17 / 502 |
intestine | 60% | 4.96 | 577 / 966 | 2% | 0.03 | 8 / 527 |
spleen | 57% | 5.16 | 138 / 241 | 0% | 0 | 0 / 0 |
skin | 45% | 3.39 | 818 / 1809 | 9% | 0.32 | 43 / 472 |
ovary | 42% | 2.95 | 76 / 180 | 11% | 0.46 | 46 / 430 |
peripheral blood | 51% | 10.12 | 476 / 929 | 0% | 0 | 0 / 0 |
esophagus | 45% | 3.05 | 655 / 1445 | 5% | 0.11 | 10 / 183 |
breast | 40% | 2.74 | 182 / 459 | 8% | 0.25 | 94 / 1118 |
blood vessel | 45% | 3.22 | 605 / 1335 | 0% | 0 | 0 / 0 |
kidney | 10% | 0.64 | 9 / 89 | 35% | 3.26 | 317 / 901 |
lung | 32% | 2.07 | 187 / 578 | 5% | 0.16 | 54 / 1155 |
adipose | 36% | 2.20 | 434 / 1204 | 0% | 0 | 0 / 0 |
bladder | 29% | 1.67 | 6 / 21 | 2% | 0.03 | 9 / 504 |
stomach | 25% | 1.61 | 91 / 359 | 2% | 0.02 | 5 / 286 |
adrenal gland | 13% | 0.76 | 33 / 258 | 13% | 0.37 | 29 / 230 |
thymus | 20% | 1.14 | 129 / 653 | 0% | 0.01 | 3 / 605 |
lymph node | 0% | 0 | 0 / 0 | 14% | 1.01 | 4 / 29 |
heart | 9% | 0.48 | 76 / 861 | 0% | 0 | 0 / 0 |
pancreas | 6% | 0.26 | 19 / 328 | 2% | 0.22 | 4 / 178 |
muscle | 5% | 0.25 | 40 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.08 | 2 / 45 |
liver | 4% | 0.23 | 8 / 226 | 0% | 0.00 | 1 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007188 | Biological process | adenylate cyclase-modulating G protein-coupled receptor signaling pathway |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0098664 | Biological process | G protein-coupled serotonin receptor signaling pathway |
GO_0032008 | Biological process | positive regulation of TOR signaling |
GO_0021795 | Biological process | cerebral cortex cell migration |
GO_0007187 | Biological process | G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger |
GO_0005929 | Cellular component | cilium |
GO_0030425 | Cellular component | dendrite |
GO_0045202 | Cellular component | synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0004993 | Molecular function | G protein-coupled serotonin receptor activity |
GO_0030594 | Molecular function | neurotransmitter receptor activity |
GO_0005515 | Molecular function | protein binding |
GO_0004969 | Molecular function | histamine receptor activity |
Gene name | HTR6 |
Protein name | 5-hydroxytryptamine receptor 6 (5-HT-6) (5-HT6) (Serotonin receptor 6) |
Synonyms | |
Description | FUNCTION: This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins that stimulate adenylate cyclase. It has a high affinity for tricyclic psychotropic drugs (By similarity). Controls pyramidal neurons migration during corticogenesis, through the regulation of CDK5 activity (By similarity). Is an activator of TOR signaling . . |
Accessions | P50406 ENST00000289753.2 |