HTR3A | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of HTR3A at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	81%	170.53	266 / 328	48%	2.14	85 / 178
intestine	96%	195.73	923 / 966	15%	1.63	79 / 527
ovary	0%	0	0 / 180	89%	41.26	382 / 430
spleen	88%	53.67	211 / 241	0%	0	0 / 0
stomach	67%	67.20	242 / 359	17%	1.37	50 / 286
esophagus	53%	47.19	773 / 1445	25%	0.89	46 / 183
lymph node	0%	0	0 / 0	76%	70.96	22 / 29
brain	58%	79.00	1540 / 2642	4%	0.06	26 / 705
lung	13%	5.74	73 / 578	47%	6.26	540 / 1155
skin	40%	31.64	721 / 1809	7%	0.35	34 / 472
bladder	24%	12.71	5 / 21	11%	2.21	57 / 504
kidney	17%	6.88	15 / 89	14%	1.05	125 / 901
adrenal gland	15%	6.79	38 / 258	13%	1.49	31 / 230
uterus	2%	0.45	3 / 170	24%	2.71	109 / 459
tonsil	0%	0	0 / 0	22%	1.15	10 / 45
thymus	10%	6.52	66 / 653	12%	0.90	71 / 605
peripheral blood	16%	4.94	152 / 929	0%	0	0 / 0
breast	6%	3.13	29 / 459	10%	0.70	112 / 1118
liver	3%	0.83	6 / 226	10%	1.29	40 / 406
prostate	7%	3.08	17 / 245	4%	0.09	18 / 502
heart	4%	1.18	36 / 861	0%	0	0 / 0
muscle	2%	0.56	14 / 803	0%	0	0 / 0
adipose	2%	0.52	19 / 1204	0%	0	0 / 0
blood vessel	1%	0.41	18 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	1%	0.01	1 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0042391	Biological process	regulation of membrane potential
GO_0060079	Biological process	excitatory postsynaptic potential
GO_0034220	Biological process	monoatomic ion transmembrane transport
GO_0007210	Biological process	serotonin receptor signaling pathway
GO_0098662	Biological process	inorganic cation transmembrane transport
GO_0099505	Biological process	regulation of presynaptic membrane potential
GO_0007268	Biological process	chemical synaptic transmission
GO_1904602	Cellular component	serotonin-activated cation-selective channel complex
GO_0005886	Cellular component	plasma membrane
GO_1902495	Cellular component	transmembrane transporter complex
GO_0043005	Cellular component	neuron projection
GO_0045202	Cellular component	synapse
GO_0045211	Cellular component	postsynaptic membrane
GO_0032154	Cellular component	cleavage furrow
GO_0022850	Molecular function	serotonin-gated monoatomic cation channel activity
GO_1904315	Molecular function	transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential
GO_0005231	Molecular function	excitatory extracellular ligand-gated monoatomic ion channel activity
GO_0042802	Molecular function	identical protein binding
GO_0051378	Molecular function	serotonin binding
GO_0099507	Molecular function	ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential
GO_0005515	Molecular function	protein binding

Gene name	HTR3A
Protein name	5-hydroxytryptamine receptor 3A (5-HT3-A) (5-HT3A) (5-hydroxytryptamine receptor 3) (5-HT-3) (5-HT3R) (Serotonin receptor 3A) (Serotonin-gated ion channel receptor) 5-hydroxytryptamine receptor 3A 5-hydroxytryptamine (Serotonin) receptor 3A
Synonyms	5HT3R HTR3
Description	FUNCTION: Forms serotonin (5-hydroxytryptamine/5-HT3)-activated cation-selective channel complexes, which when activated cause fast, depolarizing responses in neurons. .
Accessions	ENST00000504030.7 [P46098-1] B3VRH0 ENST00000510849.5 B3VRK0 ENST00000355556.6 [P46098-5] B3VRI0 B3VRH5 ENST00000299961.5 [P46098-3] ENST00000506841.6 [P46098-2] P46098 B3VRG0 B3VRJ0 B3VRG5 B3VRJ5 B3VRI5 ENST00000375498.6 [P46098-4] A0A0B4J205

HTR3A report