Insufficient scRNA-seq data for expression of HSF4 at single-cell level.
Insufficient scRNA-seq data for expression of HSF4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 5812.40 | 245 / 245 | 97% | 30.75 | 485 / 502 |
adrenal gland | 100% | 2992.95 | 257 / 258 | 94% | 27.07 | 216 / 230 |
uterus | 100% | 2618.94 | 170 / 170 | 91% | 14.37 | 419 / 459 |
kidney | 99% | 1922.57 | 88 / 89 | 89% | 50.21 | 805 / 901 |
pancreas | 100% | 2528.47 | 328 / 328 | 87% | 14.64 | 154 / 178 |
bladder | 100% | 4106.57 | 21 / 21 | 82% | 11.41 | 412 / 504 |
brain | 96% | 2883.51 | 2530 / 2642 | 81% | 13.46 | 570 / 705 |
lung | 98% | 1712.72 | 567 / 578 | 76% | 12.67 | 873 / 1155 |
thymus | 100% | 3776.08 | 653 / 653 | 74% | 8.86 | 445 / 605 |
skin | 78% | 1826.25 | 1403 / 1809 | 93% | 20.14 | 441 / 472 |
esophagus | 99% | 3268.73 | 1434 / 1445 | 71% | 7.13 | 130 / 183 |
intestine | 97% | 1876.91 | 937 / 966 | 73% | 9.09 | 385 / 527 |
breast | 99% | 2584.73 | 456 / 459 | 68% | 8.16 | 765 / 1118 |
liver | 94% | 1487.53 | 212 / 226 | 73% | 8.44 | 297 / 406 |
stomach | 99% | 1704.65 | 355 / 359 | 65% | 6.49 | 186 / 286 |
ovary | 100% | 3862.92 | 180 / 180 | 61% | 5.81 | 261 / 430 |
eye | 0% | 0 | 0 / 0 | 100% | 32.07 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.61 | 1 / 1 |
muscle | 100% | 2748.81 | 800 / 803 | 0% | 0 | 0 / 0 |
adipose | 99% | 1973.75 | 1194 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 95% | 1765.35 | 1266 / 1335 | 0% | 0 | 0 / 0 |
heart | 93% | 1674.54 | 805 / 861 | 0% | 0 | 0 / 0 |
spleen | 93% | 945.86 | 224 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 58% | 5.67 | 26 / 45 |
lymph node | 0% | 0 | 0 / 0 | 55% | 3.35 | 16 / 29 |
peripheral blood | 19% | 180.54 | 175 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070306 | Biological process | lens fiber cell differentiation |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0016607 | Cellular component | nuclear speck |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | HSF4 |
Protein name | Heat shock factor protein 4 (HSF 4) (hHSF4) (Heat shock transcription factor 4) (HSTF 4) Heat shock transcription factor 4 |
Synonyms | |
Description | FUNCTION: Heat-shock transcription factor that specifically binds heat shock promoter elements (HSE) . Required for denucleation and organelle rupture and degradation that occur during eye lens terminal differentiation, when fiber cells that compose the lens degrade all membrane-bound organelles in order to provide lens with transparency to allow the passage of light (By similarity). In this process, may regulate denucleation of lens fiber cells in part by activating DNASE2B transcription (By similarity). May be involved in DNA repair through the transcriptional regulation of RAD51 . May up-regulate p53/TP53 protein in eye lens fiber cells, possibly through protein stabilization . In the eye lens, controls the expression of alpha-crystallin B chain/CRYAB and consequently may be involved in the regulation of lysosomal acidification (By similarity). .; FUNCTION: [Isoform HSF4A]: Transcriptional repressor. .; FUNCTION: [Isoform HSF4B]: Transcriptional activator. . |
Accessions | ENST00000517729.5 Q9ULV5 ENST00000521374.6 [Q9ULV5-1] ENST00000521624.5 E5RK26 E7EWW4 H0YC14 H0YAU2 H0YAR7 ENST00000522295.5 H0YBG9 ENST00000523562.5 H0YBT7 H0YBS6 ENST00000434833.6 ENST00000519224.5 ENST00000517750.5 ENST00000517685.5 ENST00000521916.1 ENST00000520528.2 ENST00000519601.5 H0YC39 ENST00000521314.5 E5RJV4 ENST00000520304.5 E5RG51 ENST00000584272.5 [Q9ULV5-2] E5RHY0 |