Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 5 studies | 42% ± 11% | |
epithelial cell | 4 studies | 22% ± 4% | |
GABAergic neuron | 4 studies | 34% ± 10% | |
interneuron | 4 studies | 38% ± 14% | |
retinal cone cell | 3 studies | 23% ± 7% | |
ciliated cell | 3 studies | 21% ± 3% | |
neuron | 3 studies | 23% ± 2% | |
astrocyte | 3 studies | 35% ± 14% | |
oligodendrocyte precursor cell | 3 studies | 33% ± 14% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 35% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1466.33 | 180 / 180 | 100% | 16.29 | 430 / 430 |
breast | 100% | 1136.60 | 459 / 459 | 100% | 23.74 | 1117 / 1118 |
esophagus | 100% | 1196.72 | 1441 / 1445 | 100% | 17.15 | 183 / 183 |
prostate | 100% | 1181.81 | 245 / 245 | 100% | 17.95 | 500 / 502 |
uterus | 100% | 1621.08 | 170 / 170 | 100% | 24.11 | 457 / 459 |
brain | 99% | 1127.10 | 2625 / 2642 | 100% | 32.80 | 705 / 705 |
lung | 99% | 1065.07 | 574 / 578 | 100% | 19.66 | 1155 / 1155 |
bladder | 100% | 1155.81 | 21 / 21 | 99% | 16.66 | 500 / 504 |
adrenal gland | 100% | 1769.05 | 258 / 258 | 99% | 24.21 | 228 / 230 |
thymus | 100% | 940.31 | 652 / 653 | 99% | 16.89 | 600 / 605 |
stomach | 100% | 915.89 | 359 / 359 | 98% | 13.58 | 280 / 286 |
skin | 100% | 1288.59 | 1808 / 1809 | 98% | 18.90 | 461 / 472 |
intestine | 100% | 1162.10 | 966 / 966 | 97% | 13.30 | 511 / 527 |
kidney | 99% | 631.54 | 88 / 89 | 97% | 11.68 | 875 / 901 |
pancreas | 97% | 433.91 | 318 / 328 | 98% | 12.32 | 175 / 178 |
liver | 86% | 316.96 | 194 / 226 | 76% | 7.19 | 309 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.59 | 29 / 29 |
muscle | 100% | 3181.17 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1119.08 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.04 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.41 | 1 / 1 |
blood vessel | 100% | 1080.84 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1030.32 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 1600.99 | 835 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 10.25 | 69 / 80 |
peripheral blood | 51% | 454.90 | 476 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007283 | Biological process | spermatogenesis |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001162 | Molecular function | RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0042802 | Molecular function | identical protein binding |
Gene name | HSF2 |
Protein name | Heat shock transcription factor 2 Heat shock factor protein 2 (HSF 2) (Heat shock transcription factor 2) (HSTF 2) Alternative protein HSF2 HSF2 protein |
Synonyms | HSTF2 |
Description | FUNCTION: DNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. In higher eukaryotes, HSF is unable to bind to the HSE unless the cells are heat shocked. |
Accessions | Q9BS48 L8E7P1 ENST00000452194.5 [Q03933-2] Q03933 ENST00000465214.2 V9GZ44 ENST00000368455.9 [Q03933-1] |