Name | Number of supported studies | Average coverage | |
---|---|---|---|
mast cell | 35 studies | 71% ± 18% | |
macrophage | 12 studies | 39% ± 15% | |
microglial cell | 9 studies | 24% ± 6% | |
myeloid cell | 5 studies | 22% ± 2% | |
granulocyte | 4 studies | 67% ± 18% | |
brush cell | 4 studies | 67% ± 11% | |
conventional dendritic cell | 3 studies | 22% ± 2% | |
leukocyte | 3 studies | 23% ± 4% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 37% ± 14% |
Insufficient scRNA-seq data for expression of HPGDS at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 95% | 173.21 | 436 / 459 | 86% | 3.69 | 958 / 1118 |
prostate | 98% | 227.01 | 240 / 245 | 78% | 2.55 | 392 / 502 |
lung | 99% | 347.81 | 575 / 578 | 73% | 3.25 | 843 / 1155 |
brain | 58% | 60.45 | 1532 / 2642 | 96% | 7.50 | 674 / 705 |
uterus | 96% | 136.88 | 164 / 170 | 53% | 1.29 | 241 / 459 |
stomach | 97% | 130.50 | 348 / 359 | 44% | 1.42 | 125 / 286 |
bladder | 100% | 211.38 | 21 / 21 | 35% | 1.10 | 177 / 504 |
esophagus | 94% | 174.97 | 1356 / 1445 | 35% | 0.70 | 64 / 183 |
intestine | 95% | 201.20 | 914 / 966 | 34% | 0.84 | 179 / 527 |
kidney | 51% | 57.60 | 45 / 89 | 77% | 2.31 | 691 / 901 |
pancreas | 31% | 17.11 | 103 / 328 | 87% | 4.49 | 154 / 178 |
thymus | 36% | 22.01 | 232 / 653 | 78% | 2.71 | 474 / 605 |
adrenal gland | 64% | 55.66 | 166 / 258 | 48% | 1.75 | 110 / 230 |
skin | 71% | 133.95 | 1287 / 1809 | 35% | 0.86 | 163 / 472 |
ovary | 34% | 24.78 | 62 / 180 | 66% | 1.76 | 282 / 430 |
adipose | 98% | 277.93 | 1179 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 84% | 105.99 | 1126 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 60% | 1.15 | 27 / 45 |
heart | 50% | 33.11 | 433 / 861 | 0% | 0 | 0 / 0 |
liver | 17% | 7.98 | 38 / 226 | 26% | 0.60 | 106 / 406 |
spleen | 37% | 22.10 | 90 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 25% | 0.37 | 20 / 80 |
muscle | 22% | 12.04 | 180 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.51 | 3 / 29 |
peripheral blood | 5% | 3.06 | 46 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_0006693 | Biological process | prostaglandin metabolic process |
GO_0001516 | Biological process | prostaglandin biosynthetic process |
GO_2000255 | Biological process | negative regulation of male germ cell proliferation |
GO_0006749 | Biological process | glutathione metabolic process |
GO_0007626 | Biological process | locomotory behavior |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0004667 | Molecular function | prostaglandin-D synthase activity |
GO_0005509 | Molecular function | calcium ion binding |
GO_0004364 | Molecular function | glutathione transferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0000287 | Molecular function | magnesium ion binding |
Gene name | HPGDS |
Protein name | Hematopoietic prostaglandin D synthase (H-PGDS) (EC 5.3.99.2) (GST class-sigma) (Glutathione S-transferase) (EC 2.5.1.18) (Glutathione-dependent PGD synthase) (Glutathione-requiring prostaglandin D synthase) (Prostaglandin-H2 D-isomerase) |
Synonyms | GSTS PGDS PTGDS2 |
Description | FUNCTION: Bifunctional enzyme which catalyzes both the conversion of PGH2 to PGD2, a prostaglandin involved in smooth muscle contraction/relaxation and a potent inhibitor of platelet aggregation, and the conjugation of glutathione with a wide range of aryl halides and organic isothiocyanates. Also exhibits low glutathione-peroxidase activity towards cumene hydroperoxide. . |
Accessions | ENST00000295256.10 O60760 |