Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 6 studies | 26% ± 15% | |
| retinal bipolar neuron | 3 studies | 41% ± 11% | |
| OFF-bipolar cell | 3 studies | 37% ± 15% | |
| ON-bipolar cell | 3 studies | 40% ± 12% | |
| glycinergic amacrine cell | 3 studies | 32% ± 12% | |
| amacrine cell | 3 studies | 37% ± 15% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| eye | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 94% | 16922.31 | 2485 / 2642 | 96% | 53.74 | 677 / 705 |
| kidney | 0% | 0 | 0 / 89 | 72% | 2.43 | 650 / 901 |
| ovary | 0% | 0 | 0 / 180 | 69% | 2.45 | 295 / 430 |
| pancreas | 0% | 0 | 0 / 328 | 67% | 2.73 | 120 / 178 |
| thymus | 0% | 1.61 | 1 / 653 | 63% | 1.59 | 383 / 605 |
| adrenal gland | 0% | 1.69 | 1 / 258 | 49% | 3.96 | 113 / 230 |
| uterus | 1% | 2.41 | 1 / 170 | 43% | 1.38 | 196 / 459 |
| tonsil | 0% | 0 | 0 / 0 | 38% | 1.03 | 17 / 45 |
| intestine | 0% | 1.79 | 2 / 966 | 30% | 0.90 | 156 / 527 |
| lung | 0% | 0 | 0 / 578 | 24% | 0.55 | 279 / 1155 |
| esophagus | 0% | 0.40 | 1 / 1445 | 24% | 0.42 | 44 / 183 |
| stomach | 0% | 0 | 0 / 359 | 22% | 0.43 | 63 / 286 |
| bladder | 0% | 0 | 0 / 21 | 22% | 0.65 | 110 / 504 |
| breast | 0% | 0 | 0 / 459 | 21% | 0.45 | 238 / 1118 |
| skin | 0% | 0.55 | 1 / 1809 | 18% | 0.38 | 84 / 472 |
| prostate | 0% | 0 | 0 / 245 | 12% | 0.18 | 59 / 502 |
| eye | 0% | 0 | 0 / 0 | 10% | 1.00 | 8 / 80 |
| liver | 0% | 2.50 | 1 / 226 | 4% | 0.10 | 17 / 406 |
| muscle | 0% | 2.92 | 2 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0.51 | 1 / 929 | 0% | 0 | 0 / 0 |
| blood vessel | 0% | 0.35 | 1 / 1335 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0019722 | Biological process | calcium-mediated signaling |
| GO_0048839 | Biological process | inner ear development |
| GO_0060041 | Biological process | retina development in camera-type eye |
| GO_1901385 | Biological process | regulation of voltage-gated calcium channel activity |
| GO_0071277 | Biological process | cellular response to calcium ion |
| GO_1904010 | Biological process | response to Aroclor 1254 |
| GO_0099149 | Biological process | regulation of postsynaptic neurotransmitter receptor internalization |
| GO_0090314 | Biological process | positive regulation of protein targeting to membrane |
| GO_0071257 | Biological process | cellular response to electrical stimulus |
| GO_1905232 | Biological process | cellular response to L-glutamate |
| GO_1901986 | Biological process | response to ketamine |
| GO_0098978 | Cellular component | glutamatergic synapse |
| GO_0016020 | Cellular component | membrane |
| GO_0043204 | Cellular component | perikaryon |
| GO_0032809 | Cellular component | neuronal cell body membrane |
| GO_0005829 | Cellular component | cytosol |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0044327 | Cellular component | dendritic spine head |
| GO_0030424 | Cellular component | axon |
| GO_0032839 | Cellular component | dendrite cytoplasm |
| GO_0032590 | Cellular component | dendrite membrane |
| GO_0019900 | Molecular function | kinase binding |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005509 | Molecular function | calcium ion binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003779 | Molecular function | actin binding |
| Gene name | HPCA |
| Protein name | Neuron-specific calcium-binding protein hippocalcin (Calcium-binding protein BDR-2) Hippocalcin |
| Synonyms | BDR2 |
| Description | FUNCTION: Calcium-binding protein that may play a role in the regulation of voltage-dependent calcium channels . May also play a role in cyclic-nucleotide-mediated signaling through the regulation of adenylate and guanylate cyclases (By similarity). . |
| Accessions | P84074 Q0QD43 ENST00000373467.4 |
