Insufficient scRNA-seq data for expression of HOXD4 at single-cell level.
Insufficient scRNA-seq data for expression of HOXD4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 590.80 | 258 / 258 | 95% | 10.29 | 219 / 230 |
ovary | 100% | 1110.94 | 180 / 180 | 92% | 56.21 | 394 / 430 |
kidney | 100% | 1064.91 | 89 / 89 | 89% | 13.12 | 801 / 901 |
skin | 85% | 160.37 | 1544 / 1809 | 83% | 10.99 | 391 / 472 |
uterus | 100% | 1877.68 | 170 / 170 | 59% | 5.85 | 273 / 459 |
bladder | 100% | 203.19 | 21 / 21 | 55% | 5.10 | 277 / 504 |
breast | 100% | 608.09 | 459 / 459 | 43% | 2.55 | 481 / 1118 |
intestine | 100% | 466.31 | 965 / 966 | 30% | 1.47 | 157 / 527 |
prostate | 99% | 241.73 | 243 / 245 | 23% | 0.93 | 117 / 502 |
esophagus | 75% | 86.71 | 1083 / 1445 | 32% | 2.59 | 58 / 183 |
spleen | 100% | 549.49 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.87 | 1 / 1 |
adipose | 100% | 392.69 | 1199 / 1204 | 0% | 0 | 0 / 0 |
thymus | 78% | 94.95 | 511 / 653 | 4% | 0.14 | 25 / 605 |
blood vessel | 82% | 173.29 | 1094 / 1335 | 0% | 0 | 0 / 0 |
stomach | 46% | 49.50 | 165 / 359 | 31% | 1.42 | 89 / 286 |
muscle | 55% | 51.05 | 438 / 803 | 0% | 0 | 0 / 0 |
lung | 17% | 16.05 | 100 / 578 | 37% | 2.92 | 430 / 1155 |
brain | 6% | 8.91 | 146 / 2642 | 44% | 3.86 | 311 / 705 |
pancreas | 5% | 3.75 | 15 / 328 | 28% | 1.13 | 49 / 178 |
eye | 0% | 0 | 0 / 0 | 28% | 2.57 | 22 / 80 |
tonsil | 0% | 0 | 0 / 0 | 22% | 1.56 | 10 / 45 |
liver | 0% | 0.42 | 1 / 226 | 13% | 0.81 | 52 / 406 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.56 | 3 / 29 |
heart | 5% | 4.21 | 39 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048704 | Biological process | embryonic skeletal system morphogenesis |
GO_0048863 | Biological process | stem cell differentiation |
GO_0048568 | Biological process | embryonic organ development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0009952 | Biological process | anterior/posterior pattern specification |
GO_0030054 | Cellular component | cell junction |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | HOXD4 |
Protein name | Homeobox protein Hox-D4 (Homeobox protein HHO.C13) (Homeobox protein Hox-4B) (Homeobox protein Hox-5.1) |
Synonyms | HOX4B |
Description | FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. |
Accessions | ENST00000306324.4 P09016 |