Insufficient scRNA-seq data for expression of HOXC8 at single-cell level.
Insufficient scRNA-seq data for expression of HOXC8 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 99% | 531.60 | 455 / 459 | 94% | 8.14 | 1049 / 1118 |
kidney | 100% | 368.35 | 89 / 89 | 86% | 7.92 | 778 / 901 |
skin | 100% | 1008.60 | 1802 / 1809 | 85% | 7.57 | 403 / 472 |
adrenal gland | 96% | 307.44 | 248 / 258 | 82% | 16.88 | 189 / 230 |
ovary | 96% | 397.40 | 173 / 180 | 37% | 1.98 | 161 / 430 |
muscle | 100% | 857.55 | 803 / 803 | 0% | 0 | 0 / 0 |
esophagus | 2% | 2.12 | 25 / 1445 | 80% | 6.00 | 146 / 183 |
uterus | 26% | 76.45 | 45 / 170 | 50% | 2.99 | 229 / 459 |
adipose | 69% | 313.18 | 835 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 54% | 195.41 | 715 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 52% | 2.57 | 93 / 178 |
lung | 4% | 5.23 | 23 / 578 | 48% | 3.91 | 553 / 1155 |
tonsil | 0% | 0 | 0 / 0 | 51% | 2.17 | 23 / 45 |
intestine | 22% | 130.46 | 211 / 966 | 21% | 1.07 | 110 / 527 |
bladder | 14% | 16.14 | 3 / 21 | 26% | 1.46 | 131 / 504 |
stomach | 1% | 0.45 | 2 / 359 | 32% | 1.87 | 91 / 286 |
lymph node | 0% | 0 | 0 / 0 | 24% | 0.62 | 7 / 29 |
brain | 0% | 0.07 | 2 / 2642 | 15% | 1.13 | 107 / 705 |
prostate | 11% | 15.61 | 26 / 245 | 3% | 0.11 | 15 / 502 |
liver | 0% | 0 | 0 / 226 | 5% | 0.21 | 19 / 406 |
thymus | 1% | 0.89 | 6 / 653 | 3% | 0.69 | 17 / 605 |
eye | 0% | 0 | 0 / 0 | 1% | 0.03 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030182 | Biological process | neuron differentiation |
GO_0009952 | Biological process | anterior/posterior pattern specification |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0048705 | Biological process | skeletal system morphogenesis |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | HOXC8 |
Protein name | Homeobox protein Hox-C8 (Homeobox protein Hox-3A) |
Synonyms | HOX3A |
Description | FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. |
Accessions | P31273 ENST00000040584.6 |