Insufficient scRNA-seq data for expression of HOXC4 at single-cell level.
Insufficient scRNA-seq data for expression of HOXC4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 899.04 | 180 / 180 | 98% | 35.77 | 420 / 430 |
kidney | 100% | 1091.82 | 89 / 89 | 97% | 12.27 | 876 / 901 |
skin | 99% | 615.44 | 1783 / 1809 | 94% | 12.05 | 443 / 472 |
esophagus | 100% | 536.21 | 1445 / 1445 | 92% | 7.75 | 168 / 183 |
breast | 99% | 475.75 | 456 / 459 | 92% | 12.90 | 1028 / 1118 |
adrenal gland | 98% | 285.19 | 253 / 258 | 93% | 17.71 | 213 / 230 |
stomach | 97% | 378.94 | 348 / 359 | 55% | 5.62 | 158 / 286 |
uterus | 79% | 572.86 | 135 / 170 | 61% | 5.25 | 281 / 459 |
prostate | 23% | 43.03 | 57 / 245 | 87% | 7.83 | 435 / 502 |
intestine | 66% | 232.95 | 635 / 966 | 33% | 2.74 | 174 / 527 |
lymph node | 0% | 0 | 0 / 0 | 97% | 13.50 | 28 / 29 |
muscle | 96% | 241.50 | 769 / 803 | 0% | 0 | 0 / 0 |
adipose | 95% | 563.90 | 1144 / 1204 | 0% | 0 | 0 / 0 |
spleen | 83% | 145.34 | 201 / 241 | 0% | 0 | 0 / 0 |
pancreas | 1% | 1.04 | 3 / 328 | 81% | 5.15 | 145 / 178 |
lung | 21% | 37.38 | 123 / 578 | 54% | 3.65 | 621 / 1155 |
blood vessel | 68% | 599.35 | 912 / 1335 | 0% | 0 | 0 / 0 |
bladder | 19% | 25.00 | 4 / 21 | 45% | 3.56 | 225 / 504 |
tonsil | 0% | 0 | 0 / 0 | 60% | 2.92 | 27 / 45 |
brain | 6% | 21.12 | 156 / 2642 | 50% | 4.60 | 351 / 705 |
thymus | 38% | 60.48 | 248 / 653 | 7% | 0.74 | 41 / 605 |
peripheral blood | 23% | 85.77 | 213 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 10% | 0.49 | 8 / 80 |
liver | 0% | 0 | 0 / 226 | 7% | 0.52 | 29 / 406 |
heart | 2% | 3.00 | 18 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048704 | Biological process | embryonic skeletal system morphogenesis |
GO_0051216 | Biological process | cartilage development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0009952 | Biological process | anterior/posterior pattern specification |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0071837 | Molecular function | HMG box domain binding |
Gene name | HOXC4 |
Protein name | Homeobox protein Hox-C4 (Homeobox protein CP19) (Homeobox protein Hox-3E) Homeobox C4 |
Synonyms | HOX3E |
Description | FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. . |
Accessions | ENST00000430889.3 ENST00000303406.4 Q86TF7 P09017 |