Insufficient scRNA-seq data for expression of HOXC11 at single-cell level.
Insufficient scRNA-seq data for expression of HOXC11 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 509.88 | 1808 / 1809 | 56% | 3.48 | 262 / 472 |
kidney | 73% | 92.24 | 65 / 89 | 41% | 2.44 | 373 / 901 |
uterus | 42% | 49.97 | 72 / 170 | 55% | 5.17 | 253 / 459 |
breast | 13% | 13.43 | 58 / 459 | 70% | 10.28 | 788 / 1118 |
bladder | 48% | 31.57 | 10 / 21 | 31% | 2.15 | 154 / 504 |
esophagus | 0% | 0.13 | 3 / 1445 | 70% | 5.30 | 128 / 183 |
muscle | 61% | 58.23 | 487 / 803 | 0% | 0 | 0 / 0 |
adipose | 54% | 111.67 | 656 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 50% | 229.16 | 666 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 44% | 2.78 | 20 / 45 |
lung | 0% | 0 | 0 / 578 | 43% | 3.43 | 499 / 1155 |
stomach | 0% | 0.27 | 1 / 359 | 43% | 3.95 | 122 / 286 |
pancreas | 0% | 0 | 0 / 328 | 40% | 2.45 | 71 / 178 |
intestine | 8% | 8.31 | 82 / 966 | 30% | 2.51 | 160 / 527 |
prostate | 16% | 13.53 | 38 / 245 | 4% | 0.18 | 20 / 502 |
brain | 0% | 0 | 0 / 2642 | 14% | 1.18 | 101 / 705 |
adrenal gland | 0% | 0 | 0 / 258 | 9% | 0.61 | 20 / 230 |
ovary | 4% | 3.29 | 8 / 180 | 4% | 0.32 | 18 / 430 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.10 | 1 / 29 |
liver | 0% | 0 | 0 / 226 | 1% | 0.08 | 5 / 406 |
thymus | 0% | 0 | 0 / 653 | 0% | 0.01 | 2 / 605 |
peripheral blood | 0% | 0.08 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0009954 | Biological process | proximal/distal pattern formation |
GO_0001759 | Biological process | organ induction |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0001656 | Biological process | metanephros development |
GO_0042733 | Biological process | embryonic digit morphogenesis |
GO_0060272 | Biological process | embryonic skeletal joint morphogenesis |
GO_0007492 | Biological process | endoderm development |
GO_0009952 | Biological process | anterior/posterior pattern specification |
GO_0048856 | Biological process | anatomical structure development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | HOXC11 |
Protein name | Homeobox C11 Homeobox protein Hox-C11 (Homeobox protein Hox-3H) |
Synonyms | HOX3H |
Description | FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Binds to a promoter element of the lactase-phlorizin hydrolase gene. |
Accessions | O43248 ENST00000546378.1 ENST00000243082.4 J3KMZ0 |