HCFC2 | OmnibusX

Name	Number of supported studies	Average coverage
endothelial cell	4 studies	25% ± 7%	Explore
astrocyte	4 studies	20% ± 5%	Explore
glutamatergic neuron	4 studies	40% ± 13%	Explore
oligodendrocyte	4 studies	23% ± 3%	Explore
neuron	3 studies	20% ± 6%	Explore
GABAergic neuron	3 studies	38% ± 3%	Explore
oligodendrocyte precursor cell	3 studies	25% ± 7%	Explore

Name	Number of supported studies	Average coverage
brain	5 studies	33% ± 10%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	1962.23	1445 / 1445	100%	8.44	183 / 183
prostate	100%	1608.10	244 / 245	99%	9.18	499 / 502
adrenal gland	100%	1447.24	258 / 258	99%	10.44	227 / 230
breast	100%	1794.33	459 / 459	99%	9.10	1103 / 1118
thymus	100%	1554.25	652 / 653	99%	9.00	596 / 605
lung	100%	1384.43	576 / 578	99%	7.18	1139 / 1155
pancreas	99%	845.25	326 / 328	98%	7.96	174 / 178
brain	96%	832.34	2545 / 2642	100%	15.31	704 / 705
uterus	100%	2225.27	170 / 170	95%	6.56	436 / 459
kidney	97%	723.72	86 / 89	96%	9.85	869 / 901
bladder	100%	1940.24	21 / 21	93%	5.18	467 / 504
stomach	100%	1407.52	359 / 359	92%	5.65	264 / 286
liver	100%	808.88	225 / 226	92%	5.43	375 / 406
ovary	100%	1851.30	180 / 180	89%	4.00	384 / 430
intestine	100%	2233.66	966 / 966	86%	4.28	453 / 527
skin	100%	1443.34	1803 / 1809	83%	5.39	391 / 472
blood vessel	100%	2260.96	1335 / 1335	0%	0	0 / 0
muscle	100%	1881.99	803 / 803	0%	0	0 / 0
spleen	100%	988.77	241 / 241	0%	0	0 / 0
adipose	100%	1918.77	1203 / 1204	0%	0	0 / 0
heart	96%	917.83	830 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	96%	6.47	43 / 45
lymph node	0%	0	0 / 0	90%	4.81	26 / 29
peripheral blood	42%	365.55	393 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	35%	1.21	28 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0000122	Biological process	negative regulation of transcription by RNA polymerase II
GO_0006338	Biological process	chromatin remodeling
GO_0045893	Biological process	positive regulation of DNA-templated transcription
GO_0006355	Biological process	regulation of DNA-templated transcription
GO_0016032	Biological process	viral process
GO_1902615	Biological process	immune response involved in response to exogenous dsRNA
GO_0034139	Biological process	regulation of toll-like receptor 3 signaling pathway
GO_0140374	Biological process	antiviral innate immune response
GO_0035097	Cellular component	histone methyltransferase complex
GO_0071339	Cellular component	MLL1 complex
GO_0005886	Cellular component	plasma membrane
GO_0005654	Cellular component	nucleoplasm
GO_0044665	Cellular component	MLL1/2 complex
GO_0016604	Cellular component	nuclear body
GO_0005829	Cellular component	cytosol
GO_0005737	Cellular component	cytoplasm
GO_0048188	Cellular component	Set1C/COMPASS complex
GO_0005634	Cellular component	nucleus
GO_0003713	Molecular function	transcription coactivator activity
GO_0005515	Molecular function	protein binding

Gene name	HCFC2
Protein name	Host cell factor C2 Host cell factor 2 (HCF-2) (C2 factor)
Synonyms
Description
Accessions	F8VU09 ENST00000550444.1 ENST00000229330.9 [Q9Y5Z7-1] Q9Y5Z7 ENST00000544223.6 [Q9Y5Z7-2]

HCFC2 report