Name | Number of supported studies | Average coverage | |
---|---|---|---|
natural killer cell | 7 studies | 17% ± 2% | |
CD16-negative, CD56-bright natural killer cell, human | 6 studies | 19% ± 3% | |
CD16-positive, CD56-dim natural killer cell, human | 6 studies | 17% ± 2% | |
epithelial cell | 6 studies | 32% ± 15% | |
ciliated cell | 5 studies | 28% ± 7% | |
goblet cell | 5 studies | 20% ± 3% | |
CD4-positive, alpha-beta T cell | 4 studies | 17% ± 2% | |
classical monocyte | 4 studies | 26% ± 6% | |
conventional dendritic cell | 4 studies | 27% ± 8% | |
endothelial cell | 4 studies | 24% ± 4% | |
fibroblast | 4 studies | 20% ± 6% | |
abnormal cell | 4 studies | 18% ± 2% | |
basal cell | 4 studies | 29% ± 8% | |
secretory cell | 3 studies | 20% ± 4% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 16% ± 1% | |
mature NK T cell | 3 studies | 16% ± 0% | |
non-classical monocyte | 3 studies | 34% ± 7% | |
CD8-positive, alpha-beta T cell | 3 studies | 18% ± 3% | |
mucosal invariant T cell | 3 studies | 16% ± 1% | |
regulatory T cell | 3 studies | 18% ± 2% | |
macrophage | 3 studies | 21% ± 5% | |
dendritic cell | 3 studies | 28% ± 8% | |
gamma-delta T cell | 3 studies | 19% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3289.55 | 1445 / 1445 | 100% | 50.58 | 183 / 183 |
liver | 100% | 2263.95 | 226 / 226 | 100% | 57.41 | 406 / 406 |
ovary | 100% | 4025.83 | 180 / 180 | 100% | 74.53 | 430 / 430 |
pancreas | 100% | 2928.46 | 328 / 328 | 100% | 75.45 | 178 / 178 |
prostate | 100% | 4400.55 | 245 / 245 | 100% | 93.68 | 502 / 502 |
skin | 100% | 3140.16 | 1809 / 1809 | 100% | 64.57 | 472 / 472 |
thymus | 100% | 4865.17 | 653 / 653 | 100% | 108.14 | 605 / 605 |
lung | 100% | 3806.87 | 578 / 578 | 100% | 62.84 | 1154 / 1155 |
kidney | 100% | 4352.58 | 89 / 89 | 100% | 82.22 | 900 / 901 |
brain | 100% | 2079.86 | 2638 / 2642 | 100% | 62.30 | 705 / 705 |
uterus | 100% | 3904.16 | 170 / 170 | 100% | 58.15 | 458 / 459 |
stomach | 100% | 3022.02 | 359 / 359 | 100% | 56.87 | 285 / 286 |
breast | 100% | 3751.48 | 459 / 459 | 100% | 70.91 | 1114 / 1118 |
intestine | 100% | 3638.58 | 966 / 966 | 100% | 61.34 | 525 / 527 |
bladder | 100% | 3337.86 | 21 / 21 | 99% | 64.01 | 500 / 504 |
adrenal gland | 100% | 4872.10 | 258 / 258 | 99% | 65.13 | 228 / 230 |
adipose | 100% | 3136.79 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 77.55 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 51.17 | 29 / 29 |
spleen | 100% | 4012.06 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 62.82 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 33.31 | 1 / 1 |
blood vessel | 100% | 2946.54 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 5100.37 | 927 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 1543.64 | 848 / 861 | 0% | 0 | 0 / 0 |
muscle | 95% | 1100.03 | 762 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006810 | Biological process | transport |
GO_0034122 | Biological process | negative regulation of toll-like receptor signaling pathway |
GO_0050776 | Biological process | regulation of immune response |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0033106 | Cellular component | cis-Golgi network membrane |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | GPR108 |
Protein name | GPR108 protein G protein-coupled receptor 108 (HCG1811164, isoform CRA_c) Protein GPR108 (Lung seven transmembrane receptor 2) G protein-coupled receptor 108 |
Synonyms | hCG_1811164 LUSTR2 |
Description | FUNCTION: May play a role in intracellular immune modulation by activating NF-kappaB response and attenuating Toll-like-receptor response. .; FUNCTION: (Microbial infection) Plays an essential function in adeno-associated virus (AAV) transduction across multiple serotypes except AAV5. May play a critical role in mediating the endosomal virus escape or in the AAV virions trafficking from endosomes to the nucleus. . |
Accessions | ENST00000430424.8 M0QYF6 ENST00000264080.12 M0R1Q3 M0R1G1 M0QZY1 M0QZW9 Q9NPR9 M0QZ03 ENST00000594500.5 ENST00000601716.1 ENST00000597706.5 ENST00000598955.1 G5E9L6 M0R2E1 Q96I30 M0R3H4 ENST00000598052.5 ENST00000597298.5 ENST00000594034.5 B9EK73 ENST00000595908.5 |