Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 7 studies | 24% ± 8% | |
endothelial cell | 6 studies | 19% ± 3% | |
neuron | 4 studies | 20% ± 5% | |
GABAergic neuron | 4 studies | 40% ± 15% | |
glutamatergic neuron | 4 studies | 55% ± 21% | |
pancreatic A cell | 3 studies | 25% ± 8% | |
type B pancreatic cell | 3 studies | 33% ± 11% | |
non-classical monocyte | 3 studies | 20% ± 5% | |
epithelial cell | 3 studies | 32% ± 7% | |
rod bipolar cell | 3 studies | 24% ± 4% | |
macrophage | 3 studies | 18% ± 3% | |
dendritic cell | 3 studies | 25% ± 5% | |
natural killer cell | 3 studies | 16% ± 1% | |
connective tissue cell | 3 studies | 28% ± 16% | |
plasmacytoid dendritic cell | 3 studies | 22% ± 5% | |
astrocyte | 3 studies | 17% ± 1% | |
oligodendrocyte | 3 studies | 17% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1729.55 | 1445 / 1445 | 100% | 50.44 | 183 / 183 |
lung | 100% | 2853.40 | 578 / 578 | 100% | 62.33 | 1155 / 1155 |
ovary | 100% | 1656.34 | 180 / 180 | 100% | 45.75 | 430 / 430 |
uterus | 100% | 2130.84 | 170 / 170 | 100% | 43.52 | 459 / 459 |
brain | 100% | 2247.84 | 2633 / 2642 | 100% | 40.37 | 705 / 705 |
breast | 100% | 2048.21 | 459 / 459 | 100% | 49.64 | 1114 / 1118 |
pancreas | 100% | 1821.78 | 328 / 328 | 99% | 38.30 | 177 / 178 |
adrenal gland | 100% | 2330.09 | 258 / 258 | 99% | 46.40 | 228 / 230 |
thymus | 100% | 2083.15 | 653 / 653 | 99% | 28.99 | 599 / 605 |
bladder | 100% | 2009.67 | 21 / 21 | 99% | 43.29 | 498 / 504 |
kidney | 100% | 1518.80 | 89 / 89 | 99% | 34.68 | 889 / 901 |
prostate | 100% | 1861.76 | 244 / 245 | 99% | 36.93 | 497 / 502 |
liver | 99% | 1250.75 | 224 / 226 | 99% | 27.63 | 401 / 406 |
stomach | 100% | 1530.65 | 359 / 359 | 98% | 38.16 | 279 / 286 |
intestine | 100% | 1775.43 | 966 / 966 | 97% | 39.32 | 512 / 527 |
skin | 100% | 2658.42 | 1807 / 1809 | 96% | 48.87 | 451 / 472 |
adipose | 100% | 2237.99 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.88 | 29 / 29 |
spleen | 100% | 1988.73 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 39.79 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.13 | 1 / 1 |
blood vessel | 100% | 2492.60 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1203.32 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1385.93 | 843 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 67% | 945.84 | 619 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 61% | 12.22 | 49 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042147 | Biological process | retrograde transport, endosome to Golgi |
GO_0015031 | Biological process | protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0043123 | Biological process | positive regulation of canonical NF-kappaB signal transduction |
GO_0000139 | Cellular component | Golgi membrane |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | GOLT1B |
Protein name | Vesicle transport protein GOT1B (Germ cell tumor 2) (Golgi transport 1 homolog B) (Putative NF-kappa-B-activating protein 470) (hGOT1a) Golgi transport 1 homolog B (S. cerevisiae), isoform CRA_c (Golgi transport 1B) Golgi transport 1B |
Synonyms | GOT1A CGI-141 UNQ432/PRO793 HDCMA39P GCT2 hCG_25051 |
Description | FUNCTION: May be involved in fusion of ER-derived transport vesicles with the Golgi complex. FUNCTION: May be involved in fusion of ER-derived transport vesicles with the Golgi complex. . |
Accessions | Q9Y3E0 ENST00000229314.10 F5H6U7 F5GWD8 ENST00000539025.5 ENST00000539663.5 ENST00000540141.5 G3V1U5 ENST00000631252.2 ENST00000542194.1 ENST00000542038.5 F5GXH6 |