Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 24% ± 7% | |
epithelial cell | 6 studies | 33% ± 14% | |
goblet cell | 5 studies | 33% ± 17% | |
neuron | 4 studies | 21% ± 8% | |
plasma cell | 4 studies | 29% ± 13% | |
ciliated cell | 4 studies | 21% ± 4% | |
retinal rod cell | 4 studies | 21% ± 3% | |
basal cell | 4 studies | 22% ± 5% | |
fibroblast | 4 studies | 21% ± 2% | |
astrocyte | 4 studies | 25% ± 5% | |
glutamatergic neuron | 4 studies | 49% ± 22% | |
macrophage | 4 studies | 19% ± 2% | |
microglial cell | 3 studies | 23% ± 2% | |
squamous epithelial cell | 3 studies | 35% ± 25% | |
respiratory goblet cell | 3 studies | 28% ± 11% | |
GABAergic neuron | 3 studies | 50% ± 13% | |
oligodendrocyte precursor cell | 3 studies | 23% ± 5% | |
abnormal cell | 3 studies | 21% ± 8% | |
oligodendrocyte | 3 studies | 21% ± 3% | |
interneuron | 3 studies | 39% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 6566.81 | 21 / 21 | 100% | 32.59 | 504 / 504 |
esophagus | 100% | 6160.38 | 1445 / 1445 | 100% | 40.77 | 183 / 183 |
pancreas | 100% | 4804.04 | 328 / 328 | 100% | 34.48 | 178 / 178 |
prostate | 100% | 7007.76 | 245 / 245 | 100% | 43.87 | 502 / 502 |
uterus | 100% | 7075.85 | 170 / 170 | 100% | 32.77 | 459 / 459 |
breast | 100% | 5473.53 | 459 / 459 | 100% | 40.80 | 1117 / 1118 |
intestine | 100% | 6758.34 | 966 / 966 | 100% | 33.26 | 526 / 527 |
skin | 100% | 7488.43 | 1809 / 1809 | 100% | 35.83 | 471 / 472 |
thymus | 100% | 6059.01 | 653 / 653 | 100% | 31.97 | 603 / 605 |
stomach | 100% | 5103.51 | 359 / 359 | 100% | 34.36 | 285 / 286 |
lung | 100% | 6266.27 | 578 / 578 | 100% | 37.25 | 1150 / 1155 |
brain | 100% | 4792.66 | 2634 / 2642 | 100% | 27.70 | 702 / 705 |
adrenal gland | 100% | 5203.48 | 258 / 258 | 99% | 32.04 | 228 / 230 |
kidney | 100% | 3763.80 | 89 / 89 | 99% | 23.69 | 888 / 901 |
liver | 100% | 3320.70 | 226 / 226 | 96% | 16.89 | 391 / 406 |
ovary | 100% | 7009.17 | 180 / 180 | 96% | 19.94 | 414 / 430 |
adipose | 100% | 5512.57 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 28.99 | 29 / 29 |
spleen | 100% | 6733.39 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.53 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 28.68 | 1 / 1 |
blood vessel | 100% | 7076.40 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 3226.48 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 3854.96 | 855 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 21.14 | 78 / 80 |
peripheral blood | 77% | 2584.21 | 715 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005730 | Cellular component | nucleolus |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0032580 | Cellular component | Golgi cisterna membrane |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016020 | Cellular component | membrane |
GO_0045296 | Molecular function | cadherin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | GOLGA3 |
Protein name | Golgin subfamily A member 3 (Golgi complex-associated protein of 170 kDa) (GCP170) (Golgin-160) Golgin A3 |
Synonyms | |
Description | FUNCTION: Golgi auto-antigen; probably involved in maintaining Golgi structure. |
Accessions | A0A8I5KYV8 ENST00000692951.1 ENST00000687190.1 ENST00000456883.7 [Q08378-2] ENST00000688772.1 ENST00000691696.1 ENST00000545875.4 [Q08378-4] A0A8I5KSF0 ENST00000652603.2 ENST00000688114.1 A0A8I5KQ98 A0A8I5KQN2 ENST00000688068.1 ENST00000688251.1 ENST00000537317.2 A0A494C129 A0A8I5KU69 ENST00000693437.1 ENST00000450791.8 [Q08378-1] A0A8I5KVX9 ENST00000693112.1 A0A8I5QKK4 ENST00000204726.9 [Q08378-1] ENST00000692253.1 A0A8I5KU99 ENST00000690465.1 ENST00000685195.1 A0A8I5QKX6 ENST00000692831.1 A0A8I5KXF8 ENST00000687502.1 A0A8I5KPC9 A0A8I5KSX1 A0A8I5KWY9 ENST00000690178.1 ENST00000689813.1 ENST00000687479.1 ENST00000690709.1 ENST00000687165.1 A0A8I5KW20 ENST00000690897.1 ENST00000686751.1 Q08378 ENST00000685580.1 A0A8I5KQL7 ENST00000691636.1 ENST00000690511.1 ENST00000534967.2 A0A8I5KTE5 ENST00000692384.1 ENST00000685450.1 ENST00000686425.1 A0A8I5KQH9 A0A8I5KSV3 A0A8I5KUK6 ENST00000685120.1 ENST00000690573.1 A0A8I5KU25 A0A8I5QJ69 ENST00000693666.1 |