Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 22% ± 7% | |
fibroblast | 10 studies | 22% ± 6% | |
natural killer cell | 6 studies | 18% ± 2% | |
B cell | 5 studies | 18% ± 2% | |
pericyte | 5 studies | 20% ± 3% | |
CD8-positive, alpha-beta T cell | 5 studies | 17% ± 2% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 19% ± 3% | |
CD4-positive, alpha-beta T cell | 4 studies | 18% ± 3% | |
myofibroblast cell | 4 studies | 18% ± 4% | |
epithelial cell | 4 studies | 38% ± 16% | |
capillary endothelial cell | 4 studies | 17% ± 2% | |
endothelial cell of vascular tree | 4 studies | 17% ± 2% | |
gamma-delta T cell | 4 studies | 24% ± 11% | |
basal cell | 4 studies | 23% ± 4% | |
T cell | 3 studies | 19% ± 1% | |
pancreatic A cell | 3 studies | 23% ± 7% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 17% ± 2% | |
smooth muscle cell | 3 studies | 19% ± 1% | |
abnormal cell | 3 studies | 18% ± 2% | |
endothelial cell of artery | 3 studies | 17% ± 1% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 20% ± 2% | |
mucosal invariant T cell | 3 studies | 17% ± 1% | |
naive B cell | 3 studies | 17% ± 1% | |
connective tissue cell | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 8627.57 | 2642 / 2642 | 100% | 72.12 | 705 / 705 |
esophagus | 100% | 3886.69 | 1445 / 1445 | 100% | 18.93 | 183 / 183 |
skin | 100% | 4961.44 | 1809 / 1809 | 100% | 45.05 | 472 / 472 |
thymus | 100% | 5697.20 | 653 / 653 | 100% | 48.52 | 604 / 605 |
uterus | 100% | 6065.29 | 170 / 170 | 100% | 43.76 | 458 / 459 |
prostate | 100% | 5127.50 | 245 / 245 | 100% | 29.12 | 500 / 502 |
pancreas | 99% | 2779.05 | 326 / 328 | 100% | 33.19 | 178 / 178 |
lung | 100% | 5665.23 | 578 / 578 | 99% | 27.82 | 1147 / 1155 |
ovary | 100% | 7657.06 | 180 / 180 | 99% | 26.36 | 427 / 430 |
bladder | 100% | 4696.57 | 21 / 21 | 99% | 33.32 | 500 / 504 |
breast | 100% | 4715.89 | 459 / 459 | 99% | 26.25 | 1105 / 1118 |
intestine | 100% | 4134.15 | 966 / 966 | 99% | 22.85 | 520 / 527 |
kidney | 100% | 3916.12 | 89 / 89 | 98% | 24.47 | 879 / 901 |
liver | 98% | 1687.65 | 222 / 226 | 99% | 19.81 | 403 / 406 |
adrenal gland | 100% | 4236.92 | 258 / 258 | 97% | 42.01 | 224 / 230 |
stomach | 100% | 3506.20 | 359 / 359 | 97% | 19.06 | 278 / 286 |
adipose | 100% | 4614.73 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4733.52 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 43.90 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 51.92 | 29 / 29 |
spleen | 100% | 4039.87 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 37.65 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 26.11 | 1 / 1 |
muscle | 99% | 2348.83 | 795 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 2047.97 | 820 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 74% | 1957.50 | 690 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0006974 | Biological process | DNA damage response |
GO_0002456 | Biological process | T cell mediated immunity |
GO_0005615 | Cellular component | extracellular space |
GO_0005634 | Cellular component | nucleus |
GO_0005525 | Molecular function | GTP binding |
GO_0005198 | Molecular function | structural molecule activity |
GO_0003924 | Molecular function | GTPase activity |
Gene name | GNL1 |
Protein name | G protein nucleolar 1 (putative) (Guanine nucleotide-binding protein-like 1) Guanine nucleotide-binding protein-like 1 (GTP-binding protein HSR1) Guanine nucleotide-binding protein-like 1 GNL1 protein |
Synonyms | HSR1 |
Description | FUNCTION: Possible regulatory or functional link with the histocompatibility cluster. |
Accessions | ENST00000433809.1 ENST00000456550.1 ENST00000376621.8 [P36915-1] ENST00000383450.3 A0A140T994 ENST00000435788.1 ENST00000443235.1 Q6P458 ENST00000454829.5 [P36915-1] ENST00000437917.5 [P36915-1] P36915 ENST00000416639.1 ENST00000458592.1 ENST00000383596.6 [P36915-1] ENST00000417834.5 [P36915-1] A2AB27 ENST00000450423.1 ENST00000441604.5 [P36915-1] A0A140T8Y2 ENST00000430236.1 ENST00000428189.5 [P36915-1] |