Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 12 studies | 36% ± 15% | |
smooth muscle cell | 5 studies | 21% ± 1% | |
fibroblast | 3 studies | 16% ± 0% | |
glutamatergic neuron | 3 studies | 23% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 99% | 7218.66 | 455 / 459 | 79% | 153.53 | 883 / 1118 |
liver | 96% | 2756.73 | 216 / 226 | 54% | 8.97 | 219 / 406 |
brain | 77% | 2335.73 | 2026 / 2642 | 72% | 19.41 | 508 / 705 |
kidney | 71% | 1670.31 | 63 / 89 | 53% | 12.20 | 474 / 901 |
prostate | 84% | 2059.30 | 205 / 245 | 29% | 2.10 | 145 / 502 |
skin | 81% | 2377.84 | 1474 / 1809 | 28% | 6.25 | 130 / 472 |
esophagus | 95% | 3798.21 | 1378 / 1445 | 13% | 4.03 | 24 / 183 |
uterus | 91% | 3111.78 | 155 / 170 | 15% | 6.45 | 70 / 459 |
bladder | 100% | 3141.00 | 21 / 21 | 6% | 0.45 | 31 / 504 |
intestine | 93% | 5758.96 | 899 / 966 | 9% | 1.27 | 50 / 527 |
stomach | 81% | 3167.60 | 291 / 359 | 19% | 2.42 | 53 / 286 |
adipose | 99% | 4810.77 | 1192 / 1204 | 0% | 0 | 0 / 0 |
thymus | 76% | 1250.74 | 497 / 653 | 16% | 5.21 | 95 / 605 |
lung | 72% | 1160.63 | 417 / 578 | 12% | 1.61 | 141 / 1155 |
ovary | 68% | 1829.71 | 123 / 180 | 10% | 2.90 | 45 / 430 |
blood vessel | 74% | 1480.60 | 984 / 1335 | 0% | 0 | 0 / 0 |
muscle | 73% | 985.66 | 586 / 803 | 0% | 0 | 0 / 0 |
pancreas | 25% | 271.70 | 83 / 328 | 37% | 3.83 | 66 / 178 |
heart | 59% | 985.38 | 504 / 861 | 0% | 0 | 0 / 0 |
spleen | 52% | 675.17 | 126 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 15% | 179.17 | 38 / 258 | 24% | 3.76 | 56 / 230 |
tonsil | 0% | 0 | 0 / 0 | 20% | 1.37 | 9 / 45 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.81 | 4 / 29 |
eye | 0% | 0 | 0 / 0 | 14% | 2.21 | 11 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0031175 | Biological process | neuron projection development |
GO_0035860 | Biological process | glial cell-derived neurotrophic factor receptor signaling pathway |
GO_0001822 | Biological process | kidney development |
GO_0050731 | Biological process | positive regulation of peptidyl-tyrosine phosphorylation |
GO_0008584 | Biological process | male gonad development |
GO_0038179 | Biological process | neurotrophin signaling pathway |
GO_0016477 | Biological process | cell migration |
GO_0007399 | Biological process | nervous system development |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0043235 | Cellular component | receptor complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0043025 | Cellular component | neuronal cell body |
GO_0019898 | Cellular component | extrinsic component of membrane |
GO_0098797 | Cellular component | plasma membrane protein complex |
GO_0005771 | Cellular component | multivesicular body |
GO_0030424 | Cellular component | axon |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0005030 | Molecular function | neurotrophin receptor activity |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0005178 | Molecular function | integrin binding |
GO_0016167 | Molecular function | glial cell-derived neurotrophic factor receptor activity |
Gene name | GFRA1 |
Protein name | Alternative protein GFRA1 GDNF family receptor alpha-1 (GDNF receptor alpha-1) (GDNFR-alpha-1) (GFR-alpha-1) (RET ligand 1) (TGF-beta-related neurotrophic factor receptor 1) GDNF family receptor alpha 1 GDNF family receptor alpha-1 (GDNF receptor alpha-1) |
Synonyms | RETL1 GDNFRA TRNR1 |
Description | FUNCTION: Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor (By similarity). . FUNCTION: Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. . |
Accessions | ENST00000682489.1 A0A804HJK2 ENST00000369236.5 [P56159-2] ENST00000490345.2 P56159 ENST00000683792.1 ENST00000369234.5 [P56159-1] ENST00000682194.1 ENST00000682743.1 [P56159-2] ENST00000355422.11 [P56159-1] ENST00000684105.1 [P56159-2] ENST00000439649.8 [P56159-2] ENST00000683474.1 A0A804HL20 L8ECC2 |