Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 31 studies | 42% ± 19% | |
smooth muscle cell | 26 studies | 38% ± 14% | |
pericyte | 24 studies | 40% ± 20% | |
myofibroblast cell | 11 studies | 40% ± 15% | |
connective tissue cell | 8 studies | 34% ± 21% | |
retinal pigment epithelial cell | 5 studies | 59% ± 22% | |
Mueller cell | 4 studies | 25% ± 9% | |
retinal cone cell | 3 studies | 19% ± 2% | |
astrocyte | 3 studies | 31% ± 10% | |
adventitial cell | 3 studies | 32% ± 12% | |
myoepithelial cell | 3 studies | 46% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 91% | 4064.23 | 419 / 459 | 93% | 43.13 | 1036 / 1118 |
lung | 89% | 3453.52 | 516 / 578 | 94% | 51.00 | 1085 / 1155 |
intestine | 86% | 7437.77 | 832 / 966 | 92% | 33.53 | 484 / 527 |
kidney | 79% | 2311.45 | 70 / 89 | 89% | 40.54 | 798 / 901 |
prostate | 86% | 3111.98 | 211 / 245 | 80% | 23.52 | 403 / 502 |
uterus | 99% | 5047.89 | 168 / 170 | 66% | 30.51 | 303 / 459 |
esophagus | 77% | 3823.29 | 1106 / 1445 | 87% | 37.12 | 159 / 183 |
stomach | 64% | 4350.75 | 228 / 359 | 93% | 41.43 | 267 / 286 |
bladder | 86% | 4932.10 | 18 / 21 | 65% | 22.11 | 327 / 504 |
thymus | 80% | 2586.43 | 524 / 653 | 61% | 13.02 | 371 / 605 |
adrenal gland | 38% | 1450.67 | 99 / 258 | 80% | 75.58 | 184 / 230 |
skin | 51% | 799.03 | 914 / 1809 | 67% | 28.10 | 314 / 472 |
pancreas | 7% | 82.12 | 24 / 328 | 96% | 75.57 | 170 / 178 |
brain | 19% | 289.20 | 498 / 2642 | 83% | 35.17 | 586 / 705 |
blood vessel | 100% | 10098.43 | 1331 / 1335 | 0% | 0 | 0 / 0 |
adipose | 92% | 4530.13 | 1111 / 1204 | 0% | 0 | 0 / 0 |
ovary | 69% | 1856.82 | 124 / 180 | 21% | 4.04 | 92 / 430 |
liver | 45% | 938.87 | 101 / 226 | 36% | 9.55 | 147 / 406 |
tonsil | 0% | 0 | 0 / 0 | 76% | 26.01 | 34 / 45 |
heart | 72% | 2980.92 | 621 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 55% | 9.38 | 16 / 29 |
spleen | 47% | 1038.34 | 113 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 31% | 10.59 | 25 / 80 |
muscle | 5% | 67.07 | 42 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 4% | 53.61 | 36 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0051310 | Biological process | metaphase chromosome alignment |
GO_0007165 | Biological process | signal transduction |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0006955 | Biological process | immune response |
GO_0051276 | Biological process | chromosome organization |
GO_0030496 | Cellular component | midbody |
GO_0005886 | Cellular component | plasma membrane |
GO_0072686 | Cellular component | mitotic spindle |
GO_0009898 | Cellular component | cytoplasmic side of plasma membrane |
GO_0051233 | Cellular component | spindle midzone |
GO_0005634 | Cellular component | nucleus |
GO_0019003 | Molecular function | GDP binding |
GO_0005246 | Molecular function | calcium channel regulator activity |
GO_0000287 | Molecular function | magnesium ion binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | GEM |
Protein name | GTP binding protein overexpressed in skeletal muscle GTP-binding protein GEM (GTP-binding mitogen-induced T-cell protein) (RAS-like protein KIR) |
Synonyms | KIR |
Description | FUNCTION: Could be a regulatory protein, possibly participating in receptor-mediated signal transduction at the plasma membrane. Has guanine nucleotide-binding activity but undetectable intrinsic GTPase activity. |
Accessions | ENST00000396194.6 ENST00000297596.3 P55040 E5RJF9 ENST00000523433.1 |