Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| adipocyte | 7 studies | 20% ± 3% | |
| retinal cone cell | 6 studies | 33% ± 7% | |
| retinal rod cell | 4 studies | 22% ± 5% | |
| retinal bipolar neuron | 3 studies | 17% ± 1% | |
| endothelial cell | 3 studies | 32% ± 7% | |
| rod bipolar cell | 3 studies | 23% ± 2% | |
| GABAergic neuron | 3 studies | 21% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| eye | 4 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| pancreas | 100% | 3030.10 | 327 / 328 | 93% | 6.18 | 165 / 178 |
| breast | 100% | 3704.01 | 459 / 459 | 91% | 7.29 | 1013 / 1118 |
| prostate | 97% | 1828.60 | 237 / 245 | 86% | 4.34 | 433 / 502 |
| intestine | 87% | 1104.55 | 844 / 966 | 92% | 11.24 | 485 / 527 |
| ovary | 93% | 1091.17 | 168 / 180 | 85% | 7.81 | 367 / 430 |
| lung | 99% | 2433.35 | 573 / 578 | 78% | 4.55 | 898 / 1155 |
| adrenal gland | 93% | 1226.63 | 239 / 258 | 79% | 24.34 | 182 / 230 |
| skin | 75% | 885.27 | 1354 / 1809 | 97% | 15.59 | 457 / 472 |
| uterus | 98% | 2929.81 | 167 / 170 | 71% | 4.52 | 328 / 459 |
| brain | 84% | 1799.18 | 2209 / 2642 | 82% | 3.62 | 580 / 705 |
| bladder | 95% | 1900.05 | 20 / 21 | 67% | 5.46 | 336 / 504 |
| kidney | 90% | 1029.16 | 80 / 89 | 61% | 3.03 | 551 / 901 |
| esophagus | 66% | 755.40 | 949 / 1445 | 78% | 5.56 | 142 / 183 |
| stomach | 52% | 458.37 | 185 / 359 | 92% | 12.46 | 262 / 286 |
| thymus | 95% | 1335.82 | 622 / 653 | 38% | 1.45 | 227 / 605 |
| liver | 50% | 437.08 | 114 / 226 | 56% | 2.86 | 226 / 406 |
| adipose | 100% | 4397.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 17.69 | 80 / 80 |
| spleen | 100% | 17736.21 | 241 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 94% | 1717.01 | 1254 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 83% | 1387.19 | 771 / 929 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 83% | 7.57 | 24 / 29 |
| muscle | 80% | 800.95 | 646 / 803 | 0% | 0 | 0 / 0 |
| heart | 61% | 655.51 | 522 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 49% | 1.87 | 22 / 45 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0007399 | Biological process | nervous system development |
| GO_0045666 | Biological process | positive regulation of neuron differentiation |
| GO_0006629 | Biological process | lipid metabolic process |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0030426 | Cellular component | growth cone |
| GO_0048471 | Cellular component | perinuclear region of cytoplasm |
| GO_0012505 | Cellular component | endomembrane system |
| GO_0008889 | Molecular function | glycerophosphodiester phosphodiesterase activity |
| GO_0047389 | Molecular function | glycerophosphocholine phosphodiesterase activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0004435 | Molecular function | phosphatidylinositol phospholipase C activity |
| Gene name | GDPD5 |
| Protein name | GDPD5 protein Glycerophosphodiester phosphodiesterase domain-containing protein 5 (Glycerophosphocholine phosphodiesterase GDPD5) (EC 3.1.4.2) (Glycerophosphodiester phosphodiesterase 2) (Phosphoinositide phospholipase C GDPD5) (EC 3.1.4.11) Glycerophosphodiester phosphodiesterase domain containing 5 |
| Synonyms | PP9363 GDE2 PP6037 UNQ1850/PRO3580 DKFZp434D0316 |
| Description | FUNCTION: Glycerophosphodiester phosphodiesterase that promotes neurite formation and drives spinal motor neuron differentiation (By similarity). Mediates the cleavage of glycosylphosphatidylinositol (GPI) anchor of target proteins: removes the GPI-anchor of RECK, leading to release RECK from the plasma membrane (By similarity). May contribute to the osmotic regulation of cellular glycerophosphocholine (By similarity). . |
| Accessions | H0YEF5 ENST00000533805.5 [Q8WTR4-5] ENST00000534322.1 E9PJU5 ENST00000533784.5 [Q8WTR4-2] ENST00000532435.5 ENST00000527820.5 ENST00000526177.5 [Q8WTR4-3] ENST00000336898.8 [Q8WTR4-1] Q8NDN3 ENST00000529721.5 [Q8WTR4-1] Q8WTR4 ENST00000443276.6 Q9HBR3 |
